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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
37 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182844833
OKIX01000863
118683
Bacillota
GTA
Tyr
>WENV182844787
OKIX01000149
184537
Bacillota
ACG
Arg
>WENV182844775
OKIX01000116
408526
Bacillota
GCA
Cys
>WENV182844849
OKIX01002552
356660
Bacillota
CTT
Lys
>WENV182844801
OKIX01000222
296855
Bacillota
GGT
Thr
>WENV182844781
OKIX01000131
48505
Bacillota
TGA
Ser
>WENV182844770
OKIX01000105
289717
Bacillota
CTT
Lys
>WENV182844842
OKIX01001688
282752
Bacillota
TTT
Lys
>WENV182844732
OKIX01000053
20932
Bacillota
GCT
Ser
>WENV182844773
OKIX01000116
291553
Bacillota
GAA
Phe
>WENV182844809
OKIX01000340
482593
Bacillota
CCC
Gly
>WENV182844861
OKIX01003074
339995
Bacillota
TGC
Ala
>WENV182844777
OKIX01000119
20942
Bacillota
GGA
Ser
>WENV182844836
OKIX01001688
280871
Bacillota
GAA
Phe
>WENV182844837
OKIX01001688
400112
Bacillota
GCC
Gly
>WENV182844802
OKIX01000222
184495
Bacillota
CAT
Met
>WENV182844759
OKIX01000076
141202
Bacillota
CAA
Leu
>WENV182844852
OKIX01002758
29614
Bacillota
GGA
Ser
>WENV182844838
OKIX01001688
480905
Bacillota
TCC
Gly
>WENV182844798
OKIX01000222
289713
Bacillota
TGT
Thr
>WENV182844804
OKIX01000228
404091
Bacillota
TTG
Gln
>WENV182844803
OKIX01000228
289716
Bacillota
GTG
His
>WENV182844779
OKIX01000127
432453
Bacillota
TTC
Glu
>WENV182844718
OKIX01000046
480337
Bacillota
TCC
Gly
>WENV182844788
OKIX01000149
119459
Bacillota
TAG
Leu
>WENV182844778
OKIX01000127
333281
Bacillota
GTT
Asn
>WENV182844840
OKIX01001688
282757
Bacillota
GTG
His
>WENV182844772
OKIX01000116
280547
Bacillota
GTC
Asp
>WENV182844774
OKIX01000116
445407
Bacillota
GCC
Gly
>WENV182844805
OKIX01000228
289761
Bacillota
TTT
Lys
>WENV182844839
OKIX01001688
176771
Bacillota
TCT
Arg
>WENV182844819
OKIX01000383
282755
Bacillota
GGT
Thr
>WENV182844780
OKIX01000127
289715
Bacillota
TAC
Val
>WENV182844716
OKIX01000046
20943
Bacillota
CGA
Ser
>WENV182844717
OKIX01000046
208539
Bacillota
TGG
Pro
>WENV182844719
OKIX01000046
184539
Bacillota
TCT
Arg
>WENV182844841
OKIX01001688
400113
Bacillota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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