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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
36 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182850971
OKLI01000183
398936
Bacillota
CCT
Arg
>WENV182850936
OKLI01000005
184537
Bacillota
ACG
Arg
>WENV182850939
OKLI01000009
408526
Bacillota
GCA
Cys
>WENV182850945
OKLI01000035
296855
Bacillota
GGT
Thr
>WENV182851034
OKLI01002200
48505
Bacillota
TGA
Ser
>WENV182851008
OKLI01000710
398935
Bacillota
>WENV182850962
OKLI01000120
46658
Bacillota
AAG
Leu
>WENV182850958
OKLI01000101
289717
Bacillota
CTT
Lys
>WENV182850953
OKLI01000064
20257
Bacillota
>WENV182850973
OKLI01000206
20932
Bacillota
GCT
Ser
>WENV182851001
OKLI01000437
291553
Bacillota
GAA
Phe
>WENV182850952
OKLI01000063
482593
Bacillota
CCC
Gly
>WENV182850957
OKLI01000092
20942
Bacillota
GGA
Ser
>WENV182851009
OKLI01000710
65075
Bacillota
TAA
Leu
>WENV182850946
OKLI01000035
184495
Bacillota
CAT
Met
>WENV182850963
OKLI01000137
141202
Bacillota
CAA
Leu
>WENV182850948
OKLI01000040
89466
Bacillota
CAA
Leu
>WENV182850977
OKLI01000236
176046
Bacillota
GTT
Asn
>WENV182850942
OKLI01000035
289713
Bacillota
TGT
Thr
>WENV182850959
OKLI01000105
439172
Bacillota
CCG
Arg
>WENV182850991
OKLI01000293
404091
Bacillota
TTG
Gln
>WENV182850980
OKLI01000272
398934
Bacillota
CCG
Arg
>WENV182850990
OKLI01000293
289716
Bacillota
GTG
His
>WENV182850955
OKLI01000068
432453
Bacillota
TTC
Glu
>WENV182850968
OKLI01000169
480337
Bacillota
TCC
Gly
>WENV182850938
OKLI01000005
119459
Bacillota
TAG
Leu
>WENV182850974
OKLI01000226
104114
Bacillota
CAG
Leu
>WENV182850954
OKLI01000068
333281
Bacillota
GTT
Asn
>WENV182851000
OKLI01000437
280547
Bacillota
GTC
Asp
>WENV182851032
OKLI01001850
445407
Bacillota
GCC
Gly
>WENV182850992
OKLI01000293
289761
Bacillota
TTT
Lys
>WENV182850956
OKLI01000068
289715
Bacillota
TAC
Val
>WENV182851025
OKLI01000789
20943
Bacillota
CGA
Ser
>WENV182850941
OKLI01000018
480366
Bacillota
GGT
Thr
>WENV182850967
OKLI01000169
208539
Bacillota
TGG
Pro
>WENV182850969
OKLI01000169
184539
Bacillota
TCT
Arg
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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