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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
20 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182855066
OKMX01004577
448352
Bacillota
GCC
Gly
>WENV182855035
OKMX01002184
362245
Bacillota
TAC
Val
>WENV182855067
OKMX01004577
480520
Bacillota
TCC
Gly
>WENV182854877
OKMX01000061
289717
Bacillota
CTT
Lys
>WENV182855045
OKMX01002337
282752
Bacillota
TTT
Lys
>WENV182855065
OKMX01004577
141334
Bacillota
TAG
Leu
>WENV182855069
OKMX01004577
291558
Bacillota
CTT
Lys
>WENV182855039
OKMX01002337
280871
Bacillota
GAA
Phe
>WENV182855040
OKMX01002337
400112
Bacillota
GCC
Gly
>WENV182854825
OKMX01000021
283292
Bacillota
GAA
Phe
>WENV182854843
OKMX01000030
283292
Bacillota
GAA
Phe
>WENV182855041
OKMX01002337
480905
Bacillota
TCC
Gly
>WENV182855070
OKMX01004577
281302
Bacillota
GTG
His
>WENV182855068
OKMX01004577
182384
Bacillota
TCT
Arg
>WENV182855043
OKMX01002337
282757
Bacillota
GTG
His
>WENV182855020
OKMX01001332
344985
Bacillota
GAA
Phe
>WENV182855042
OKMX01002337
176771
Bacillota
TCT
Arg
>WENV182854968
OKMX01000369
320075
Bacillota
GAA
Phe
>WENV182855058
OKMX01003017
118370
Bacillota
TAG
Leu
>WENV182855044
OKMX01002337
400113
Bacillota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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