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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182856152
OKNH01000722
172207
Bacteroidota
GGG
Pro
>WENV182856155
OKNH01000758
73057
Bacteroidota
GAG
Leu
>WENV182856139
OKNH01000126
280557
Bacteroidota
CAT
Met
>WENV182856171
OKNH01001954
351598
Bacteroidota
CGG
Pro
>WENV182856135
OKNH01000111
398872
Bacteroidota
GGT
Thr
>WENV182856138
OKNH01000125
175936
Bacteroidota
CAT
Met
>WENV182856157
OKNH01000853
398860
Bacteroidota
CTC
Glu
>WENV182856129
OKNH01000096
480404
Bacteroidota
TTG
Gln
>WENV182856160
OKNH01001042
27524
Bacteroidota
GGA
Ser
>WENV182856163
OKNH01001285
280532
Bacteroidota
>WENV182856165
OKNH01001411
480318
Bacteroidota
CTG
Gln
>WENV182856168
OKNH01001599
176192
Bacteroidota
TCT
Arg
>WENV182856164
OKNH01001367
69204
Bacteroidota
TGA
Ser
>WENV182856169
OKNH01001674
117804
Bacteroidota
TAG
Leu
>WENV182856150
OKNH01000420
365112
Bacteroidota
TTT
Lys
>WENV182856159
OKNH01000970
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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