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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
70 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182860273
OKOR01001299
284109
Bacillota
>WENV182860137
OKOR01000205
140922
Bacillota
GTA
Tyr
>WENV182860233
OKOR01000418
140922
Bacillota
GTA
Tyr
>WENV182860297
OKOR01003640
480520
Bacillota
TCC
Gly
>WENV182860090
OKOR01000079
284108
Bacillota
GGC
Ala
>WENV182860190
OKOR01000366
281077
Bacillota
GTT
Asn
>WENV182860035
OKOR01000015
184537
Bacillota
ACG
Arg
>WENV182860080
OKOR01000056
20870
Bacillota
CGA
Ser
>WENV182860271
OKOR01001218
408526
Bacillota
GCA
Cys
>WENV182860223
OKOR01000418
178945
Bacillota
GTC
Asp
>WENV182860163
OKOR01000253
296855
Bacillota
GGT
Thr
>WENV182860143
OKOR01000209
48505
Bacillota
TGA
Ser
>WENV182860265
OKOR01001024
179261
Bacillota
CGG
Pro
>WENV182860236
OKOR01000418
400628
Bacillota
TTG
Gln
>WENV182860192
OKOR01000389
289717
Bacillota
CTT
Lys
>WENV182860204
OKOR01000414
407852
Bacillota
TTC
Glu
>WENV182860228
OKOR01000418
407852
Bacillota
TTC
Glu
>WENV182860039
OKOR01000018
400752
Bacillota
GTT
Asn
>WENV182860136
OKOR01000200
20932
Bacillota
GCT
Ser
>WENV182860126
OKOR01000160
291553
Bacillota
GAA
Phe
>WENV182860275
OKOR01001321
295166
Bacillota
TGC
Ala
>WENV182860295
OKOR01003640
141334
Bacillota
TAG
Leu
>WENV182860289
OKOR01002711
482593
Bacillota
CCC
Gly
>WENV182860234
OKOR01000418
481151
Bacillota
CCA
Trp
>WENV182860218
OKOR01000418
176769
Bacillota
ACG
Arg
>WENV182860081
OKOR01000057
20942
Bacillota
GGA
Ser
>WENV182860268
OKOR01001041
294336
Bacillota
TTT
Lys
>WENV182860294
OKOR01003640
283502
Bacillota
TTT
Lys
>WENV182860284
OKOR01002331
195463
Bacillota
GTC
Asp
>WENV182860164
OKOR01000253
184495
Bacillota
CAT
Met
>WENV182860024
OKOR01000006
141202
Bacillota
CAA
Leu
>WENV182860281
OKOR01001872
283292
Bacillota
GAA
Phe
>WENV182860181
OKOR01000304
481244
Bacillota
CCC
Gly
>WENV182860235
OKOR01000418
284111
Bacillota
GTG
His
>WENV182860227
OKOR01000418
20502
Bacillota
GCT
Ser
>WENV182860205
OKOR01000414
285948
Bacillota
CGT
Thr
>WENV182860263
OKOR01000835
56503
Bacillota
CAG
Leu
>WENV182860232
OKOR01000418
284110
Bacillota
GAA
Phe
>WENV182860089
OKOR01000079
284107
Bacillota
CGC
Ala
>WENV182860139
OKOR01000206
282730
Bacillota
TAC
Val
>WENV182860160
OKOR01000253
289713
Bacillota
TGT
Thr
>WENV182860118
OKOR01000127
179263
Bacillota
TCT
Arg
>WENV182860216
OKOR01000418
284886
Bacillota
TGT
Thr
>WENV182860188
OKOR01000342
404091
Bacillota
TTG
Gln
>WENV182860224
OKOR01000418
306976
Bacillota
GAA
Phe
>WENV182860229
OKOR01000418
4053
Bacillota
TGA
Ser
>WENV182860187
OKOR01000342
289716
Bacillota
GTG
His
>WENV182860203
OKOR01000414
284105
Bacillota
GTT
Asn
>WENV182860238
OKOR01000418
73685
Bacillota
CAA
Leu
>WENV182860158
OKOR01000251
480337
Bacillota
TCC
Gly
>WENV182860237
OKOR01000418
481245
Bacillota
GCA
Cys
>WENV182860036
OKOR01000015
119459
Bacillota
TAG
Leu
>WENV182860102
OKOR01000102
400626
Bacillota
CCG
Arg
>WENV182860287
OKOR01002331
281326
Bacillota
TGC
Ala
>WENV182860125
OKOR01000160
280547
Bacillota
GTC
Asp
>WENV182860226
OKOR01000418
179264
Bacillota
GAT
Ile
>WENV182860097
OKOR01000091
46845
Bacillota
AAG
Leu
>WENV182860215
OKOR01000418
284112
Bacillota
TTT
Lys
>WENV182860208
OKOR01000417
289761
Bacillota
TTT
Lys
>WENV182860298
OKOR01003640
203851
Bacillota
TCT
Arg
>WENV182860214
OKOR01000417
289715
Bacillota
TAC
Val
>WENV182860210
OKOR01000417
289715
Bacillota
TAC
Val
>WENV182860108
OKOR01000107
20943
Bacillota
CGA
Ser
>WENV182860178
OKOR01000294
281196
Bacillota
CAT
Met
>WENV182860140
OKOR01000206
74100
Bacillota
CAG
Leu
>WENV182860219
OKOR01000418
197141
Bacillota
TGG
Pro
>WENV182860159
OKOR01000251
184539
Bacillota
TCT
Arg
>WENV182860138
OKOR01000206
8644
Bacillota
GGA
Ser
>WENV182860091
OKOR01000082
408869
Bacillota
CTC
Glu
>WENV182860189
OKOR01000358
481173
Bacillota
CTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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