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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
16 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182861063
OKPA01000486
73057
Bacteroidota
GAG
Leu
>WENV182861044
OKPA01000216
280557
Bacteroidota
CAT
Met
>WENV182861048
OKPA01000256
351598
Bacteroidota
CGG
Pro
>WENV182861013
OKPA01000074
398872
Bacteroidota
GGT
Thr
>WENV182861028
OKPA01000116
175936
Bacteroidota
CAT
Met
>WENV182861018
OKPA01000087
398860
Bacteroidota
CTC
Glu
>WENV182861019
OKPA01000094
480404
Bacteroidota
TTG
Gln
>WENV182861035
OKPA01000160
99847
Bacteroidota
GTA
Tyr
>WENV182861029
OKPA01000134
280532
Bacteroidota
>WENV182861010
OKPA01000072
229246
Bacteroidota
GGC
Ala
>WENV182861036
OKPA01000186
176192
Bacteroidota
TCT
Arg
>WENV182861068
OKPA01000729
117804
Bacteroidota
TAG
Leu
>WENV182860975
OKPA01000011
365112
Bacteroidota
TTT
Lys
>WENV182861041
OKPA01000201
398836
Bacteroidota
GCA
Cys
>WENV182860992
OKPA01000038
170323
Bacteroidota
GGG
Pro
>WENV182861067
OKPA01000543
322836
Bacteroidota
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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