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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
57 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182861335
OKPE01000094
283336
Actinomycetota
GGT
Thr
>WENV182861279
OKPE01000004
175907
Actinomycetota
TAC
Val
>WENV182861353
OKPE01000282
280498
Actinomycetota
GTT
Asn
>WENV182861312
OKPE01000065
178581
Actinomycetota
TAC
Val
>WENV182861292
OKPE01000017
295964
Actinomycetota
GTT
Asn
>WENV182861271
OKPE01000002
56083
Actinomycetota
CGA
Ser
>WENV182861281
OKPE01000005
140768
Actinomycetota
TAG
Leu
>WENV182861333
OKPE01000092
400421
Actinomycetota
GAC
Val
>WENV182861306
OKPE01000044
176075
Actinomycetota
TCT
Arg
>WENV182861319
OKPE01000079
100162
Actinomycetota
TGA
Ser
>WENV182861300
OKPE01000029
176078
Actinomycetota
GGG
Pro
>WENV182861263
OKPE01000001
59689
Actinomycetota
GGA
Ser
>WENV182861274
OKPE01000003
175837
Actinomycetota
ACG
Arg
>WENV182861275
OKPE01000003
175837
Actinomycetota
ACG
Arg
>WENV182861270
OKPE01000002
29393
Actinomycetota
GCT
Ser
>WENV182861323
OKPE01000082
150281
Actinomycetota
TTG
Gln
>WENV182861336
OKPE01000094
399203
Actinomycetota
CAT
Met
>WENV182861310
OKPE01000058
283323
Actinomycetota
TGT
Thr
>WENV182861264
OKPE01000001
349164
Actinomycetota
CTC
Glu
>WENV182861302
OKPE01000036
398947
Actinomycetota
CCA
Trp
>WENV182861277
OKPE01000003
280702
Actinomycetota
GGC
Ala
>WENV182861286
OKPE01000008
176077
Actinomycetota
CAT
Met
>WENV182861352
OKPE01000277
178580
Actinomycetota
GAA
Phe
>WENV182861327
OKPE01000090
481050
Actinomycetota
CCC
Gly
>WENV182861291
OKPE01000016
21508
Actinomycetota
GAG
Leu
>WENV182861318
OKPE01000076
342697
Actinomycetota
TGC
Ala
>WENV182861295
OKPE01000022
280524
Actinomycetota
TGC
Ala
>WENV182861287
OKPE01000008
398948
Actinomycetota
TTC
Glu
>WENV182861288
OKPE01000010
150272
Actinomycetota
TAA
Leu
>WENV182861268
OKPE01000002
117777
Actinomycetota
>WENV182861269
OKPE01000002
175949
Actinomycetota
CAT
Met
>WENV182861326
OKPE01000089
191955
Actinomycetota
TGT
Thr
>WENV182861283
OKPE01000007
280544
Actinomycetota
GTG
His
>WENV182861351
OKPE01000277
178579
Actinomycetota
GTC
Asp
>WENV182861329
OKPE01000091
283329
Actinomycetota
GTG
His
>WENV182861282
OKPE01000005
280496
Actinomycetota
CGT
Thr
>WENV182861296
OKPE01000025
280703
Actinomycetota
CCT
Arg
>WENV182861278
OKPE01000003
184157
Actinomycetota
TGG
Pro
>WENV182861342
OKPE01000148
283335
Actinomycetota
CTT
Lys
>WENV182861280
OKPE01000005
323758
Actinomycetota
CGT
Thr
>WENV182861308
OKPE01000047
358727
Actinomycetota
CCG
Arg
>WENV182861293
OKPE01000018
99865
Actinomycetota
CAG
Leu
>WENV182861267
OKPE01000001
222475
Actinomycetota
CTT
Lys
>WENV182861324
OKPE01000085
100161
Actinomycetota
CAG
Leu
>WENV182861321
OKPE01000079
300986
Actinomycetota
ACG
Arg
>WENV182861348
OKPE01000201
56387
Actinomycetota
CGA
Ser
>WENV182861265
OKPE01000001
398853
Actinomycetota
CTG
Gln
>WENV182861289
OKPE01000010
175843
Actinomycetota
CAA
Leu
>WENV182861301
OKPE01000036
3983
Actinomycetota
GCT
Ser
>WENV182861272
OKPE01000002
56075
Actinomycetota
TGA
Ser
>WENV182861332
OKPE01000092
504131
Actinomycetota
GCA
Cys
>WENV182861364
OKPE01000544
178582
Actinomycetota
TTT
Lys
>WENV182861294
OKPE01000022
179238
Actinomycetota
GAT
Ile
>WENV182861316
OKPE01000073
400420
Actinomycetota
CTG
Gln
>WENV182861276
OKPE01000003
506175
Actinomycetota
TTG
Gln
>WENV182861340
OKPE01000120
283322
Actinomycetota
CGT
Thr
>WENV182861290
OKPE01000012
480376
Actinomycetota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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