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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
57 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182865185
OKQJ01000029
481233
Actinomycetota
CCC
Gly
>WENV182865345
OKQJ01000559
179231
Actinomycetota
TAC
Val
>WENV182865312
OKQJ01000362
482602
Actinomycetota
CCC
Gly
>WENV182865183
OKQJ01000025
280498
Actinomycetota
GTT
Asn
>WENV182865220
OKQJ01000067
140768
Actinomycetota
TAG
Leu
>WENV182865393
OKQJ01001398
140768
Actinomycetota
TAG
Leu
>WENV182865361
OKQJ01000726
56384
Actinomycetota
TGA
Ser
>WENV182865308
OKQJ01000295
176075
Actinomycetota
TCT
Arg
>WENV182865222
OKQJ01000070
176075
Actinomycetota
TCT
Arg
>WENV182865307
OKQJ01000273
175848
Actinomycetota
TGG
Pro
>WENV182865246
OKQJ01000104
176078
Actinomycetota
GGG
Pro
>WENV182865304
OKQJ01000266
176078
Actinomycetota
GGG
Pro
>WENV182865390
OKQJ01001385
482604
Actinomycetota
TTG
Gln
>WENV182865281
OKQJ01000181
482604
Actinomycetota
TTG
Gln
>WENV182865344
OKQJ01000544
59689
Actinomycetota
GGA
Ser
>WENV182865158
OKQJ01000009
59689
Actinomycetota
GGA
Ser
>WENV182865290
OKQJ01000245
175837
Actinomycetota
ACG
Arg
>WENV182865286
OKQJ01000225
29393
Actinomycetota
GCT
Ser
>WENV182865342
OKQJ01000535
280549
Actinomycetota
CAC
Val
>WENV182865273
OKQJ01000151
280549
Actinomycetota
CAC
Val
>WENV182865207
OKQJ01000050
398947
Actinomycetota
CCA
Trp
>WENV182865331
OKQJ01000494
56383
Actinomycetota
CGA
Ser
>WENV182865226
OKQJ01000074
20450
Actinomycetota
GAG
Leu
>WENV182865280
OKQJ01000181
280702
Actinomycetota
GGC
Ala
>WENV182865279
OKQJ01000181
280702
Actinomycetota
GGC
Ala
>WENV182865204
OKQJ01000042
176077
Actinomycetota
CAT
Met
>WENV182865180
OKQJ01000017
280524
Actinomycetota
TGC
Ala
>WENV182865283
OKQJ01000198
398948
Actinomycetota
TTC
Glu
>WENV182865201
OKQJ01000042
398948
Actinomycetota
TTC
Glu
>WENV182865242
OKQJ01000098
150272
Actinomycetota
TAA
Leu
>WENV182865287
OKQJ01000230
117777
Actinomycetota
>WENV182865399
OKQJ01001561
280523
Actinomycetota
GGC
Ala
>WENV182865341
OKQJ01000535
418252
Actinomycetota
GAC
Val
>WENV182865272
OKQJ01000151
418252
Actinomycetota
GAC
Val
>WENV182865181
OKQJ01000017
191955
Actinomycetota
TGT
Thr
>WENV182865221
OKQJ01000068
280544
Actinomycetota
GTG
His
>WENV182865289
OKQJ01000234
280544
Actinomycetota
GTG
His
>WENV182865205
OKQJ01000042
280703
Actinomycetota
CCT
Arg
>WENV182865353
OKQJ01000645
20205
Actinomycetota
GCT
Ser
>WENV182865275
OKQJ01000158
178569
Actinomycetota
CAT
Met
>WENV182865266
OKQJ01000121
280450
Actinomycetota
TTT
Lys
>WENV182865161
OKQJ01000009
280450
Actinomycetota
TTT
Lys
>WENV182865219
OKQJ01000067
323758
Actinomycetota
CGT
Thr
>WENV182865224
OKQJ01000073
56451
Actinomycetota
CGA
Ser
>WENV182865267
OKQJ01000126
99865
Actinomycetota
CAG
Leu
>WENV182865186
OKQJ01000029
99865
Actinomycetota
CAG
Leu
>WENV182865162
OKQJ01000009
222475
Actinomycetota
CTT
Lys
>WENV182865397
OKQJ01001493
175843
Actinomycetota
CAA
Leu
>WENV182865306
OKQJ01000273
175843
Actinomycetota
CAA
Leu
>WENV182865206
OKQJ01000050
3983
Actinomycetota
GCT
Ser
>WENV182865187
OKQJ01000032
317680
Actinomycetota
CCG
Arg
>WENV182865160
OKQJ01000009
430848
Actinomycetota
CTG
Gln
>WENV182865159
OKQJ01000009
289788
Actinomycetota
CTC
Glu
>WENV182865179
OKQJ01000017
179238
Actinomycetota
GAT
Ile
>WENV182865225
OKQJ01000073
60767
Actinomycetota
TGA
Ser
>WENV182865392
OKQJ01001398
280470
Actinomycetota
CGT
Thr
>WENV182865210
OKQJ01000054
176640
Actinomycetota
TAC
Val
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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