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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
29 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182892248
OKSH01045230
404226
Bacteroidota
CCT
Arg
>WENV182892125
OKSH01019949
175904
Bacteroidota
CGG
Pro
>WENV182891805
OKSH01004634
289031
Bacteroidota
CAT
Met
>WENV182891975
OKSH01009701
20492
Bacteroidota
GGA
Ser
>WENV182891250
OKSH01000490
20206
Bacteroidota
GGA
Ser
>WENV182890997
OKSH01000058
483416
Bacteroidota
CTG
Gln
>WENV182891456
OKSH01001196
56493
Bacteroidota
TGA
Ser
>WENV182891720
OKSH01003220
175903
Bacteroidota
GTG
His
>WENV182891980
OKSH01009869
156406
Bacteroidota
TAC
Val
>WENV182891574
OKSH01001936
405877
Bacteroidota
GGT
Thr
>WENV182891933
OKSH01007994
29791
Bacteroidota
GCT
Ser
>WENV182892282
OKSH01057196
20449
Bacteroidota
GGA
Ser
>WENV182891709
OKSH01003069
21127
Bacteroidota
GGA
Ser
>WENV182891646
OKSH01002528
57807
Bacteroidota
TGA
Ser
>WENV182891934
OKSH01007994
398860
Bacteroidota
CTC
Glu
>WENV182892158
OKSH01023007
280451
Bacteroidota
CGT
Thr
>WENV182891297
OKSH01000649
99847
Bacteroidota
GTA
Tyr
>WENV182891357
OKSH01000849
186874
Bacteroidota
CAT
Met
>WENV182892044
OKSH01012980
280478
Bacteroidota
GCC
Gly
>WENV182892100
OKSH01016545
186108
Bacteroidota
GTT
Asn
>WENV182892115
OKSH01018256
175844
Bacteroidota
GGC
Ala
>WENV182891277
OKSH01000575
398828
Bacteroidota
CCG
Arg
>WENV182891453
OKSH01001193
140771
Bacteroidota
>WENV182892128
OKSH01020291
176192
Bacteroidota
TCT
Arg
>WENV182891721
OKSH01003222
176192
Bacteroidota
TCT
Arg
>WENV182891175
OKSH01000340
280446
Bacteroidota
TTT
Lys
>WENV182891577
OKSH01001951
484496
Bacteroidota
TTG
Gln
>WENV182891981
OKSH01009999
285750
Bacteroidota
CCC
Gly
>WENV182891939
OKSH01008178
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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