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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
49 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182893318
OKSK01000313
172207
Bacteroidota
GGG
Pro
>WENV182893295
OKSK01000203
295385
Bacteroidota
CCA
Trp
>WENV182893232
OKSK01000064
117741
Bacteroidota
TAG
Leu
>WENV182893158
OKSK01000002
398829
Bacteroidota
CCT
Arg
>WENV182893250
OKSK01000100
175838
Bacteroidota
GTT
Asn
>WENV182893566
OKSK01003308
404226
Bacteroidota
CCT
Arg
>WENV182893519
OKSK01002372
175904
Bacteroidota
CGG
Pro
>WENV182893795
OKSK01014765
289031
Bacteroidota
CAT
Met
>WENV182893210
OKSK01000028
280557
Bacteroidota
CAT
Met
>WENV182893236
OKSK01000070
20206
Bacteroidota
GGA
Ser
>WENV182893808
OKSK01016599
483416
Bacteroidota
CTG
Gln
>WENV182893565
OKSK01003308
398871
Bacteroidota
TTC
Glu
>WENV182893688
OKSK01006955
175906
Bacteroidota
GTG
His
>WENV182893256
OKSK01000129
175903
Bacteroidota
GTG
His
>WENV182893220
OKSK01000040
351598
Bacteroidota
CGG
Pro
>WENV182893545
OKSK01002785
118089
Bacteroidota
TAG
Leu
>WENV182893452
OKSK01001467
203954
Bacteroidota
GTC
Asp
>WENV182893656
OKSK01005978
178907
Bacteroidota
TCT
Arg
>WENV182893294
OKSK01000195
20449
Bacteroidota
GGA
Ser
>WENV182893279
OKSK01000173
175902
Bacteroidota
GGC
Ala
>WENV182893424
OKSK01001111
480404
Bacteroidota
TTG
Gln
>WENV182893299
OKSK01000218
280451
Bacteroidota
CGT
Thr
>WENV182893388
OKSK01000833
99847
Bacteroidota
GTA
Tyr
>WENV182893227
OKSK01000059
99847
Bacteroidota
GTA
Tyr
>WENV182893631
OKSK01005409
399200
Bacteroidota
CAT
Met
>WENV182893679
OKSK01006623
186874
Bacteroidota
CAT
Met
>WENV182893235
OKSK01000070
488746
Bacteroidota
CTG
Gln
>WENV182893267
OKSK01000166
280478
Bacteroidota
GCC
Gly
>WENV182893522
OKSK01002387
27524
Bacteroidota
GGA
Ser
>WENV182893456
OKSK01001482
175844
Bacteroidota
GGC
Ala
>WENV182893690
OKSK01007343
73011
Bacteroidota
CAA
Leu
>WENV182893740
OKSK01009967
480318
Bacteroidota
CTG
Gln
>WENV182893670
OKSK01006422
480318
Bacteroidota
CTG
Gln
>WENV182893344
OKSK01000435
398828
Bacteroidota
CCG
Arg
>WENV182893613
OKSK01004851
74084
Bacteroidota
CAG
Leu
>WENV182893338
OKSK01000404
159415
Bacteroidota
TAC
Val
>WENV182893681
OKSK01006653
480325
Bacteroidota
CTG
Gln
>WENV182893400
OKSK01000896
176192
Bacteroidota
TCT
Arg
>WENV182893544
OKSK01002775
69204
Bacteroidota
TGA
Ser
>WENV182893373
OKSK01000741
69204
Bacteroidota
TGA
Ser
>WENV182893259
OKSK01000137
484496
Bacteroidota
TTG
Gln
>WENV182893790
OKSK01014244
285750
Bacteroidota
CCC
Gly
>WENV182893530
OKSK01002473
117804
Bacteroidota
TAG
Leu
>WENV182893674
OKSK01006494
365112
Bacteroidota
TTT
Lys
>WENV182893407
OKSK01000948
365112
Bacteroidota
TTT
Lys
>WENV182893599
OKSK01004265
398836
Bacteroidota
GCA
Cys
>WENV182893310
OKSK01000268
398836
Bacteroidota
GCA
Cys
>WENV182893224
OKSK01000052
398836
Bacteroidota
GCA
Cys
>WENV182893629
OKSK01005401
170323
Bacteroidota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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