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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
39 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182897361
OKSP01000128
117741
Bacteroidota
TAG
Leu
>WENV182897273
OKSP01000008
398829
Bacteroidota
CCT
Arg
>WENV182897407
OKSP01000242
175838
Bacteroidota
GTT
Asn
>WENV182897408
OKSP01000242
175838
Bacteroidota
GTT
Asn
>WENV182897454
OKSP01000428
289031
Bacteroidota
CAT
Met
>WENV182897483
OKSP01000574
289031
Bacteroidota
CAT
Met
>WENV182897374
OKSP01000171
280557
Bacteroidota
CAT
Met
>WENV182897337
OKSP01000073
20206
Bacteroidota
GGA
Ser
>WENV182897512
OKSP01000739
483416
Bacteroidota
CTG
Gln
>WENV182897349
OKSP01000095
201819
Bacteroidota
CAT
Met
>WENV182897312
OKSP01000036
56493
Bacteroidota
TGA
Ser
>WENV182897756
OKSP01004640
175903
Bacteroidota
GTG
His
>WENV182897431
OKSP01000324
351598
Bacteroidota
CGG
Pro
>WENV182897409
OKSP01000244
405877
Bacteroidota
GGT
Thr
>WENV182897743
OKSP01004127
29791
Bacteroidota
GCT
Ser
>WENV182897804
OKSP01006482
182267
Bacteroidota
GTT
Asn
>WENV182897459
OKSP01000473
21127
Bacteroidota
GGA
Ser
>WENV182897275
OKSP01000008
56072
Bacteroidota
TAA
Leu
>WENV182897867
OKSP01010842
175886
Bacteroidota
GGC
Ala
>WENV182897298
OKSP01000024
175902
Bacteroidota
GGC
Ala
>WENV182897952
OKSP01019764
179697
Bacteroidota
TGT
Thr
>WENV182897744
OKSP01004127
398860
Bacteroidota
CTC
Glu
>WENV182897461
OKSP01000482
174201
Bacteroidota
GGG
Pro
>WENV182897366
OKSP01000134
174201
Bacteroidota
GGG
Pro
>WENV182897311
OKSP01000032
280451
Bacteroidota
CGT
Thr
>WENV182897359
OKSP01000126
99847
Bacteroidota
GTA
Tyr
>WENV182897382
OKSP01000209
186874
Bacteroidota
CAT
Met
>WENV182897336
OKSP01000073
488746
Bacteroidota
CTG
Gln
>WENV182897435
OKSP01000352
175844
Bacteroidota
GGC
Ala
>WENV182897844
OKSP01009139
280515
Bacteroidota
CCA
Trp
>WENV182897283
OKSP01000011
398828
Bacteroidota
CCG
Arg
>WENV182897460
OKSP01000476
69204
Bacteroidota
TGA
Ser
>WENV182897513
OKSP01000740
280446
Bacteroidota
TTT
Lys
>WENV182897321
OKSP01000049
484496
Bacteroidota
TTG
Gln
>WENV182897527
OKSP01000856
27502
Bacteroidota
GGA
Ser
>WENV182897923
OKSP01016886
373714
Bacteroidota
GCC
Gly
>WENV182897638
OKSP01001913
365112
Bacteroidota
TTT
Lys
>WENV182897481
OKSP01000557
365112
Bacteroidota
TTT
Lys
>WENV182897491
OKSP01000605
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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