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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
76 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182898525
OKSR01007279
99852
Bacillota
GTA
Tyr
>WENV182898649
OKSR01019165
280500
Bacillota
TGC
Ala
>WENV182898764
OKSR01041402
405363
Bacillota
GCA
Cys
>WENV182898297
OKSR01000627
405357
Bacillota
TTC
Glu
>WENV182898788
OKSR01049065
291579
Bacillota
GAA
Phe
>WENV182898375
OKSR01001523
175842
Bacillota
CAC
Val
>WENV182898340
OKSR01000981
175842
Bacillota
CAC
Val
>WENV182898653
OKSR01019206
291629
Bacillota
CCA
Trp
>WENV182898397
OKSR01002042
184497
Bacillota
GGG
Pro
>WENV182898242
OKSR01000357
179176
Bacillota
ACG
Arg
>WENV182898253
OKSR01000426
190476
Bacillota
CAT
Met
>WENV182898355
OKSR01001162
82124
Bacillota
TAA
Leu
>WENV182898746
OKSR01036558
284506
Bacillota
CCA
Trp
>WENV182898287
OKSR01000587
73664
Bacillota
CAG
Leu
>WENV182898366
OKSR01001281
280447
Bacillota
GAC
Val
>WENV182898321
OKSR01000816
280447
Bacillota
GAC
Val
>WENV182898300
OKSR01000655
280447
Bacillota
GAC
Val
>WENV182898511
OKSR01006483
5692
Bacillota
GCT
Ser
>WENV182898325
OKSR01000846
5692
Bacillota
GCT
Ser
>WENV182898599
OKSR01012010
312274
Bacillota
GGC
Ala
>WENV182898609
OKSR01013065
186123
Bacillota
GTC
Asp
>WENV182898638
OKSR01017859
175825
Bacillota
GAT
Ile
>WENV182898283
OKSR01000529
284723
Bacillota
TAC
Val
>WENV182898276
OKSR01000526
73009
Bacillota
CAG
Leu
>WENV182898213
OKSR01000268
291581
Bacillota
CGG
Pro
>WENV182898346
OKSR01001015
291581
Bacillota
CGG
Pro
>WENV182898274
OKSR01000526
175859
Bacillota
TCT
Arg
>WENV182898637
OKSR01017859
280436
Bacillota
TGC
Ala
>WENV182898424
OKSR01002585
175831
Bacillota
ACG
Arg
>WENV182898442
OKSR01003139
175831
Bacillota
ACG
Arg
>WENV182898696
OKSR01025775
332181
Bacillota
TGT
Thr
>WENV182898420
OKSR01002529
284627
Bacillota
GAA
Phe
>WENV182898327
OKSR01000874
284627
Bacillota
GAA
Phe
>WENV182898610
OKSR01013065
291634
Bacillota
GAA
Phe
>WENV182898775
OKSR01044962
295350
Bacillota
TGC
Ala
>WENV182898362
OKSR01001212
480322
Bacillota
CTG
Gln
>WENV182898345
OKSR01001015
480322
Bacillota
CTG
Gln
>WENV182898212
OKSR01000268
480322
Bacillota
CTG
Gln
>WENV182898389
OKSR01001783
187364
Bacillota
CAT
Met
>WENV182898458
OKSR01003583
175868
Bacillota
GTT
Asn
>WENV182898437
OKSR01002993
175868
Bacillota
GTT
Asn
>WENV182898317
OKSR01000791
175868
Bacillota
GTT
Asn
>WENV182898516
OKSR01006906
314834
Bacillota
TGC
Ala
>WENV182898563
OKSR01010215
322848
Bacillota
CTT
Lys
>WENV182898457
OKSR01003583
398854
Bacillota
CTC
Glu
>WENV182898436
OKSR01002993
398854
Bacillota
CTC
Glu
>WENV182898316
OKSR01000791
398854
Bacillota
CTC
Glu
>WENV182898536
OKSR01008249
291576
Bacillota
CCC
Gly
>WENV182898337
OKSR01000914
291576
Bacillota
CCC
Gly
>WENV182898359
OKSR01001197
480324
Bacillota
TTG
Gln
>WENV182898771
OKSR01043264
400963
Bacillota
GTT
Asn
>WENV182898685
OKSR01023997
497729
Bacillota
CCA
Trp
>WENV182898683
OKSR01023932
323864
Bacillota
TGC
Ala
>WENV182898305
OKSR01000668
280444
Bacillota
GGT
Thr
>WENV182898224
OKSR01000311
280444
Bacillota
GGT
Thr
>WENV182898222
OKSR01000311
280444
Bacillota
GGT
Thr
>WENV182898207
OKSR01000232
280444
Bacillota
GGT
Thr
>WENV182898361
OKSR01001208
483485
Bacillota
CCC
Gly
>WENV182898733
OKSR01033816
291597
Bacillota
TGC
Ala
>WENV182898386
OKSR01001727
179755
Bacillota
CCG
Arg
>WENV182898376
OKSR01001533
179755
Bacillota
CCG
Arg
>WENV182898338
OKSR01000928
179755
Bacillota
CCG
Arg
>WENV182898430
OKSR01002756
46835
Bacillota
TAA
Leu
>WENV182898254
OKSR01000426
398832
Bacillota
TTC
Glu
>WENV182898351
OKSR01001108
118669
Bacillota
GTA
Tyr
>WENV182898602
OKSR01012128
201856
Bacillota
GAT
Ile
>WENV182898232
OKSR01000331
175857
Bacillota
GTG
His
>WENV182898608
OKSR01013017
398833
Bacillota
TGT
Thr
>WENV182898304
OKSR01000668
175849
Bacillota
GTC
Asp
>WENV182898221
OKSR01000311
175849
Bacillota
GTC
Asp
>WENV182898735
OKSR01033816
280486
Bacillota
TGC
Ala
>WENV182898611
OKSR01013065
405393
Bacillota
GCC
Gly
>WENV182898510
OKSR01006483
56074
Bacillota
TGA
Ser
>WENV182898324
OKSR01000846
56074
Bacillota
TGA
Ser
>WENV182898452
OKSR01003450
280473
Bacillota
TGG
Pro
>WENV182898256
OKSR01000446
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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