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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
43 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182904623
OKTA01002625
280500
Bacillota
TGC
Ala
>WENV182904543
OKTA01000773
291629
Bacillota
CCA
Trp
>WENV182904629
OKTA01003256
236579
Bacillota
GAT
Ile
>WENV182904364
OKTA01000120
348419
Bacillota
GTT
Asn
>WENV182904440
OKTA01000308
184497
Bacillota
GGG
Pro
>WENV182904463
OKTA01000364
179176
Bacillota
ACG
Arg
>WENV182904313
OKTA01000048
184687
Bacillota
CAT
Met
>WENV182904522
OKTA01000629
312274
Bacillota
GGC
Ala
>WENV182904450
OKTA01000335
186123
Bacillota
GTC
Asp
>WENV182904461
OKTA01000364
284723
Bacillota
TAC
Val
>WENV182904673
OKTA01009247
481217
Bacillota
GCA
Cys
>WENV182904700
OKTA01020866
280646
Bacillota
TGC
Ala
>WENV182904552
OKTA01000956
407726
Bacillota
CTG
Gln
>WENV182904507
OKTA01000508
407726
Bacillota
CTG
Gln
>WENV182904358
OKTA01000107
398835
Bacillota
GCC
Gly
>WENV182904681
OKTA01010664
353153
Bacillota
TGC
Ala
>WENV182904567
OKTA01001185
332181
Bacillota
TGT
Thr
>WENV182904451
OKTA01000335
291634
Bacillota
GAA
Phe
>WENV182904533
OKTA01000733
346451
Bacillota
TTT
Lys
>WENV182904682
OKTA01010849
187364
Bacillota
CAT
Met
>WENV182904452
OKTA01000337
497729
Bacillota
CCA
Trp
>WENV182904432
OKTA01000300
497729
Bacillota
CCA
Trp
>WENV182904403
OKTA01000219
497729
Bacillota
CCA
Trp
>WENV182904335
OKTA01000072
73638
Bacillota
AAG
Leu
>WENV182904603
OKTA01001705
323864
Bacillota
TGC
Ala
>WENV182904687
OKTA01013613
175911
Bacillota
GTC
Asp
>WENV182904625
OKTA01002825
292374
Bacillota
TGC
Ala
>WENV182904457
OKTA01000364
398857
Bacillota
TTC
Glu
>WENV182904462
OKTA01000364
46835
Bacillota
TAA
Leu
>WENV182904460
OKTA01000364
175915
Bacillota
GTC
Asp
>WENV182904347
OKTA01000082
280476
Bacillota
TTT
Lys
>WENV182904398
OKTA01000184
332651
Bacillota
GTT
Asn
>WENV182904624
OKTA01002825
201856
Bacillota
GAT
Ile
>WENV182904570
OKTA01001185
289123
Bacillota
GGT
Thr
>WENV182904588
OKTA01001396
321248
Bacillota
TAC
Val
>WENV182904293
OKTA01000024
321248
Bacillota
TAC
Val
>WENV182904290
OKTA01000021
280483
Bacillota
GAA
Phe
>WENV182904275
OKTA01000016
280483
Bacillota
GAA
Phe
>WENV182904291
OKTA01000021
285756
Bacillota
GCC
Gly
>WENV182904276
OKTA01000016
285756
Bacillota
GCC
Gly
>WENV182904344
OKTA01000082
179166
Bacillota
TCT
Arg
>WENV182904664
OKTA01007091
280486
Bacillota
TGC
Ala
>WENV182904408
OKTA01000227
405393
Bacillota
GCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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