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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
39 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182909352
OKTH01009481
280500
Bacillota
TGC
Ala
>WENV182909117
OKTH01000606
405363
Bacillota
GCA
Cys
>WENV182909106
OKTH01000583
280428
Bacillota
GAA
Phe
>WENV182909277
OKTH01003429
291579
Bacillota
GAA
Phe
>WENV182909185
OKTH01001082
175842
Bacillota
CAC
Val
>WENV182909416
OKTH01021627
291629
Bacillota
CCA
Trp
>WENV182909329
OKTH01007376
179176
Bacillota
ACG
Arg
>WENV182909216
OKTH01001691
190476
Bacillota
CAT
Met
>WENV182909309
OKTH01005637
73664
Bacillota
CAG
Leu
>WENV182909009
OKTH01000180
280447
Bacillota
GAC
Val
>WENV182908985
OKTH01000099
280447
Bacillota
GAC
Val
>WENV182908968
OKTH01000071
5692
Bacillota
GCT
Ser
>WENV182909413
OKTH01021627
186123
Bacillota
GTC
Asp
>WENV182909234
OKTH01002151
73009
Bacillota
CAG
Leu
>WENV182908965
OKTH01000063
291581
Bacillota
CGG
Pro
>WENV182909172
OKTH01000950
175859
Bacillota
TCT
Arg
>WENV182909110
OKTH01000595
175831
Bacillota
ACG
Arg
>WENV182909414
OKTH01021627
291634
Bacillota
GAA
Phe
>WENV182909307
OKTH01005454
484885
Bacillota
TCC
Gly
>WENV182909078
OKTH01000432
480322
Bacillota
CTG
Gln
>WENV182908964
OKTH01000063
480322
Bacillota
CTG
Gln
>WENV182909035
OKTH01000259
175868
Bacillota
GTT
Asn
>WENV182909034
OKTH01000259
398854
Bacillota
CTC
Glu
>WENV182909011
OKTH01000188
291576
Bacillota
CCC
Gly
>WENV182909236
OKTH01002171
480324
Bacillota
TTG
Gln
>WENV182909296
OKTH01005022
323864
Bacillota
TGC
Ala
>WENV182909382
OKTH01014511
292374
Bacillota
TGC
Ala
>WENV182909448
OKTH01030234
117745
Bacillota
GTA
Tyr
>WENV182909221
OKTH01001731
280444
Bacillota
GGT
Thr
>WENV182909325
OKTH01007026
483485
Bacillota
CCC
Gly
>WENV182909229
OKTH01002019
179755
Bacillota
CCG
Arg
>WENV182909217
OKTH01001691
398832
Bacillota
TTC
Glu
>WENV182909393
OKTH01016785
175915
Bacillota
GTC
Asp
>WENV182909226
OKTH01001803
321248
Bacillota
TAC
Val
>WENV182909105
OKTH01000571
398833
Bacillota
TGT
Thr
>WENV182909115
OKTH01000606
175849
Bacillota
GTC
Asp
>WENV182909415
OKTH01021627
405393
Bacillota
GCC
Gly
>WENV182908967
OKTH01000071
56074
Bacillota
TGA
Ser
>WENV182909313
OKTH01006186
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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