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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
80 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182917254
OKTU01004728
99852
Bacillota
GTA
Tyr
>WENV182917176
OKTU01002919
405363
Bacillota
GCA
Cys
>WENV182916879
OKTU01000091
290391
Bacillota
TAC
Val
>WENV182917384
OKTU01009216
280428
Bacillota
GAA
Phe
>WENV182916855
OKTU01000030
280492
Bacillota
CTT
Lys
>WENV182916912
OKTU01000191
280492
Bacillota
CTT
Lys
>WENV182917121
OKTU01001652
175842
Bacillota
CAC
Val
>WENV182917009
OKTU01000576
175842
Bacillota
CAC
Val
>WENV182917420
OKTU01011246
236579
Bacillota
GAT
Ile
>WENV182917341
OKTU01007507
348419
Bacillota
GTT
Asn
>WENV182917435
OKTU01012210
184497
Bacillota
GGG
Pro
>WENV182917255
OKTU01004764
179176
Bacillota
ACG
Arg
>WENV182917240
OKTU01004384
184687
Bacillota
CAT
Met
>WENV182917419
OKTU01011246
295166
Bacillota
TGC
Ala
>WENV182917110
OKTU01001538
190476
Bacillota
CAT
Met
>WENV182917485
OKTU01018521
73664
Bacillota
CAG
Leu
>WENV182917114
OKTU01001551
280447
Bacillota
GAC
Val
>WENV182917053
OKTU01000880
280447
Bacillota
GAC
Val
>WENV182917030
OKTU01000778
280447
Bacillota
GAC
Val
>WENV182916988
OKTU01000468
280447
Bacillota
GAC
Val
>WENV182917076
OKTU01001092
5692
Bacillota
GCT
Ser
>WENV182917101
OKTU01001464
186123
Bacillota
GTC
Asp
>WENV182917137
OKTU01002056
73009
Bacillota
CAG
Leu
>WENV182917183
OKTU01003010
481217
Bacillota
GCA
Cys
>WENV182916938
OKTU01000266
291581
Bacillota
CGG
Pro
>WENV182917106
OKTU01001494
175859
Bacillota
TCT
Arg
>WENV182916975
OKTU01000420
175859
Bacillota
TCT
Arg
>WENV182916884
OKTU01000094
290325
Bacillota
GCC
Gly
>WENV182917280
OKTU01005260
21311
Bacillota
GCT
Ser
>WENV182917044
OKTU01000799
175831
Bacillota
ACG
Arg
>WENV182917055
OKTU01000899
332181
Bacillota
TGT
Thr
>WENV182917102
OKTU01001464
291634
Bacillota
GAA
Phe
>WENV182917303
OKTU01005677
346451
Bacillota
TTT
Lys
>WENV182917143
OKTU01002290
484885
Bacillota
TCC
Gly
>WENV182917024
OKTU01000704
480322
Bacillota
CTG
Gln
>WENV182916937
OKTU01000266
480322
Bacillota
CTG
Gln
>WENV182917335
OKTU01007243
401685
Bacillota
TTG
Gln
>WENV182917281
OKTU01005280
175868
Bacillota
GTT
Asn
>WENV182917257
OKTU01004780
175868
Bacillota
GTT
Asn
>WENV182917049
OKTU01000820
175868
Bacillota
GTT
Asn
>WENV182917256
OKTU01004780
398854
Bacillota
CTC
Glu
>WENV182917048
OKTU01000820
398854
Bacillota
CTC
Glu
>WENV182917081
OKTU01001107
291576
Bacillota
CCC
Gly
>WENV182917198
OKTU01003449
480324
Bacillota
TTG
Gln
>WENV182917072
OKTU01001043
480324
Bacillota
TTG
Gln
>WENV182917436
OKTU01012347
400963
Bacillota
GTT
Asn
>WENV182916891
OKTU01000108
497729
Bacillota
CCA
Trp
>WENV182917184
OKTU01003042
497729
Bacillota
CCA
Trp
>WENV182916917
OKTU01000199
56079
Bacillota
AAG
Leu
>WENV182916916
OKTU01000199
56079
Bacillota
AAG
Leu
>WENV182917509
OKTU01021503
398857
Bacillota
TTC
Glu
>WENV182916889
OKTU01000103
117745
Bacillota
GTA
Tyr
>WENV182917209
OKTU01003828
280444
Bacillota
GGT
Thr
>WENV182917129
OKTU01001851
280444
Bacillota
GGT
Thr
>WENV182917108
OKTU01001503
280444
Bacillota
GGT
Thr
>WENV182916847
OKTU01000025
46643
Bacillota
TGA
Ser
>WENV182917391
OKTU01009523
179755
Bacillota
CCG
Arg
>WENV182917311
OKTU01006006
179755
Bacillota
CCG
Arg
>WENV182917010
OKTU01000583
179755
Bacillota
CCG
Arg
>WENV182917220
OKTU01004100
46835
Bacillota
TAA
Leu
>WENV182917642
OKTU01055674
330413
Bacillota
CTT
Lys
>WENV182917111
OKTU01001538
398832
Bacillota
TTC
Glu
>WENV182917219
OKTU01004100
175915
Bacillota
GTC
Asp
>WENV182917196
OKTU01003363
280476
Bacillota
TTT
Lys
>WENV182916929
OKTU01000242
280476
Bacillota
TTT
Lys
>WENV182916844
OKTU01000025
280462
Bacillota
GAA
Phe
>WENV182917021
OKTU01000690
398852
Bacillota
CTC
Glu
>WENV182916959
OKTU01000317
398852
Bacillota
CTC
Glu
>WENV182916838
OKTU01000016
398852
Bacillota
CTC
Glu
>WENV182916836
OKTU01000012
398852
Bacillota
CTC
Glu
>WENV182917058
OKTU01000899
289123
Bacillota
GGT
Thr
>WENV182917365
OKTU01008375
321248
Bacillota
TAC
Val
>WENV182916999
OKTU01000561
321248
Bacillota
TAC
Val
>WENV182917555
OKTU01028610
398833
Bacillota
TGT
Thr
>WENV182917208
OKTU01003828
175849
Bacillota
GTC
Asp
>WENV182917372
OKTU01008780
280463
Bacillota
TTT
Lys
>WENV182917162
OKTU01002559
405393
Bacillota
GCC
Gly
>WENV182917075
OKTU01001092
56074
Bacillota
TGA
Ser
>WENV182917252
OKTU01004701
280473
Bacillota
TGG
Pro
>WENV182916892
OKTU01000117
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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