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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
45 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182919367
OKTX01008195
99852
Bacillota
GTA
Tyr
>WENV182919496
OKTX01018991
280500
Bacillota
TGC
Ala
>WENV182919025
OKTX01000538
290391
Bacillota
TAC
Val
>WENV182919389
OKTX01008911
280428
Bacillota
GAA
Phe
>WENV182919397
OKTX01009400
280428
Bacillota
GAA
Phe
>WENV182919604
OKTX01037218
291579
Bacillota
GAA
Phe
>WENV182919292
OKTX01004204
291629
Bacillota
CCA
Trp
>WENV182919328
OKTX01005784
184497
Bacillota
GGG
Pro
>WENV182919077
OKTX01000737
179176
Bacillota
ACG
Arg
>WENV182918834
OKTX01000036
184687
Bacillota
CAT
Met
>WENV182919566
OKTX01028914
295166
Bacillota
TGC
Ala
>WENV182919605
OKTX01037334
190476
Bacillota
CAT
Met
>WENV182919401
OKTX01009531
5692
Bacillota
GCT
Ser
>WENV182919290
OKTX01004204
186123
Bacillota
GTC
Asp
>WENV182919569
OKTX01028958
175825
Bacillota
GAT
Ile
>WENV182918833
OKTX01000036
284723
Bacillota
TAC
Val
>WENV182919556
OKTX01026244
189473
Bacillota
GAT
Ile
>WENV182919321
OKTX01005298
291581
Bacillota
CGG
Pro
>WENV182919093
OKTX01000852
175859
Bacillota
TCT
Arg
>WENV182919568
OKTX01028958
280436
Bacillota
TGC
Ala
>WENV182918881
OKTX01000114
290325
Bacillota
GCC
Gly
>WENV182919472
OKTX01016280
21311
Bacillota
GCT
Ser
>WENV182919031
OKTX01000558
21311
Bacillota
GCT
Ser
>WENV182919136
OKTX01001226
175831
Bacillota
ACG
Arg
>WENV182919495
OKTX01018991
175916
Bacillota
GAT
Ile
>WENV182919320
OKTX01005298
480322
Bacillota
CTG
Gln
>WENV182919427
OKTX01011644
175868
Bacillota
GTT
Asn
>WENV182919444
OKTX01013242
289716
Bacillota
GTG
His
>WENV182919426
OKTX01011644
398854
Bacillota
CTC
Glu
>WENV182919413
OKTX01010786
480324
Bacillota
TTG
Gln
>WENV182919394
OKTX01009181
186051
Bacillota
GAT
Ile
>WENV182919453
OKTX01013818
117745
Bacillota
GTA
Tyr
>WENV182919359
OKTX01007649
280444
Bacillota
GGT
Thr
>WENV182919423
OKTX01011472
179755
Bacillota
CCG
Arg
>WENV182919447
OKTX01013271
46835
Bacillota
TAA
Leu
>WENV182919606
OKTX01037334
398832
Bacillota
TTC
Glu
>WENV182919302
OKTX01004498
398832
Bacillota
TTC
Glu
>WENV182919446
OKTX01013271
175915
Bacillota
GTC
Asp
>WENV182919028
OKTX01000538
285756
Bacillota
GCC
Gly
>WENV182919546
OKTX01025455
398833
Bacillota
TGT
Thr
>WENV182919358
OKTX01007649
175849
Bacillota
GTC
Asp
>WENV182919639
OKTX01050271
280486
Bacillota
TGC
Ala
>WENV182919291
OKTX01004204
405393
Bacillota
GCC
Gly
>WENV182919400
OKTX01009531
56074
Bacillota
TGA
Ser
>WENV182919379
OKTX01008685
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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