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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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|
Keyword
|
BLAST
|
Download
|
HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
51 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182924457
OKUG01011699
99852
Bacillota
GTA
Tyr
>WENV182924402
OKUG01006636
280428
Bacillota
GAA
Phe
>WENV182924524
OKUG01022319
179917
Bacillota
CAT
Met
>WENV182924525
OKUG01022319
302145
Bacillota
GAA
Phe
>WENV182924048
OKUG01000014
280466
Bacillota
TAC
Val
>WENV182924100
OKUG01000160
280492
Bacillota
CTT
Lys
>WENV182924073
OKUG01000081
280492
Bacillota
CTT
Lys
>WENV182924212
OKUG01000620
175842
Bacillota
CAC
Val
>WENV182924370
OKUG01004362
295166
Bacillota
TGC
Ala
>WENV182924210
OKUG01000618
190476
Bacillota
CAT
Met
>WENV182924165
OKUG01000326
73664
Bacillota
CAG
Leu
>WENV182924310
OKUG01002223
5692
Bacillota
GCT
Ser
>WENV182924219
OKUG01000675
291581
Bacillota
CGG
Pro
>WENV182924183
OKUG01000400
175859
Bacillota
TCT
Arg
>WENV182924154
OKUG01000303
175859
Bacillota
TCT
Arg
>WENV182924287
OKUG01001711
175831
Bacillota
ACG
Arg
>WENV182924401
OKUG01006621
284627
Bacillota
GAA
Phe
>WENV182924459
OKUG01011984
346451
Bacillota
TTT
Lys
>WENV182924274
OKUG01001364
332864
Bacillota
CTT
Lys
>WENV182924300
OKUG01002086
282730
Bacillota
TAC
Val
>WENV182924301
OKUG01002086
282731
Bacillota
GTG
His
>WENV182924218
OKUG01000675
480322
Bacillota
CTG
Gln
>WENV182924137
OKUG01000237
480322
Bacillota
CTG
Gln
>WENV182924349
OKUG01003503
175868
Bacillota
GTT
Asn
>WENV182924196
OKUG01000481
175868
Bacillota
GTT
Asn
>WENV182924139
OKUG01000242
175868
Bacillota
GTT
Asn
>WENV182924282
OKUG01001630
322848
Bacillota
CTT
Lys
>WENV182924348
OKUG01003503
398854
Bacillota
CTC
Glu
>WENV182924138
OKUG01000242
398854
Bacillota
CTC
Glu
>WENV182924242
OKUG01000914
291576
Bacillota
CCC
Gly
>WENV182924083
OKUG01000102
480324
Bacillota
TTG
Gln
>WENV182924337
OKUG01002950
303718
Bacillota
TGT
Thr
>WENV182924164
OKUG01000326
56079
Bacillota
AAG
Leu
>WENV182924163
OKUG01000326
56079
Bacillota
AAG
Leu
>WENV182924081
OKUG01000091
404126
Bacillota
GCC
Gly
>WENV182924545
OKUG01028578
204381
Bacillota
GAT
Ile
>WENV182924178
OKUG01000389
117745
Bacillota
GTA
Tyr
>WENV182924171
OKUG01000357
280444
Bacillota
GGT
Thr
>WENV182924280
OKUG01001602
46643
Bacillota
TGA
Ser
>WENV182924185
OKUG01000403
179755
Bacillota
CCG
Arg
>WENV182924211
OKUG01000618
398832
Bacillota
TTC
Glu
>WENV182924182
OKUG01000396
118669
Bacillota
GTA
Tyr
>WENV182924051
OKUG01000021
280462
Bacillota
GAA
Phe
>WENV182924147
OKUG01000275
398852
Bacillota
CTC
Glu
>WENV182924181
OKUG01000395
184539
Bacillota
TCT
Arg
>WENV182924358
OKUG01003684
285601
Bacillota
TTC
Glu
>WENV182924115
OKUG01000178
175857
Bacillota
GTG
His
>WENV182924502
OKUG01017990
285756
Bacillota
GCC
Gly
>WENV182924213
OKUG01000622
398833
Bacillota
TGT
Thr
>WENV182924052
OKUG01000021
280463
Bacillota
TTT
Lys
>WENV182924309
OKUG01002223
56074
Bacillota
TGA
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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