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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
34 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182932199
OKUU01000371
179231
Actinomycetota
TAC
Val
>WENV182932515
OKUU01009793
482602
Actinomycetota
CCC
Gly
>WENV182932115
OKUU01000077
176499
Actinomycetota
CAT
Met
>WENV182932519
OKUU01009990
175883
Actinomycetota
GAT
Ile
>WENV182932452
OKUU01005631
280498
Actinomycetota
GTT
Asn
>WENV182932471
OKUU01006774
280503
Actinomycetota
CCT
Arg
>WENV182932609
OKUU01016030
56083
Actinomycetota
CGA
Ser
>WENV182932575
OKUU01013133
140768
Actinomycetota
TAG
Leu
>WENV182932255
OKUU01000905
175837
Actinomycetota
ACG
Arg
>WENV182932279
OKUU01001242
280441
Actinomycetota
CCG
Arg
>WENV182932220
OKUU01000523
176638
Actinomycetota
GGG
Pro
>WENV182932103
OKUU01000060
280524
Actinomycetota
TGC
Ala
>WENV182932104
OKUU01000060
280523
Actinomycetota
GGC
Ala
>WENV182932224
OKUU01000584
175841
Actinomycetota
TAT
Ile
>WENV182932712
OKUU01034219
280496
Actinomycetota
CGT
Thr
>WENV182932334
OKUU01002207
175872
Actinomycetota
GTC
Asp
>WENV182932116
OKUU01000077
20205
Actinomycetota
GCT
Ser
>WENV182932599
OKUU01015182
175926
Actinomycetota
CAT
Met
>WENV182932175
OKUU01000255
280450
Actinomycetota
TTT
Lys
>WENV182932165
OKUU01000224
480329
Actinomycetota
CCC
Gly
>WENV182932513
OKUU01009595
175882
Actinomycetota
TGG
Pro
>WENV182932335
OKUU01002224
20209
Actinomycetota
GAG
Leu
>WENV182932720
OKUU01037275
480319
Actinomycetota
TTG
Gln
>WENV182932205
OKUU01000427
280499
Actinomycetota
CCT
Arg
>WENV182932164
OKUU01000221
398853
Actinomycetota
CTG
Gln
>WENV182932241
OKUU01000690
175843
Actinomycetota
CAA
Leu
>WENV182932182
OKUU01000300
203883
Actinomycetota
TCT
Arg
>WENV182932305
OKUU01001785
46642
Actinomycetota
CGA
Ser
>WENV182932393
OKUU01003675
104211
Actinomycetota
CAG
Leu
>WENV182932114
OKUU01000077
117903
Actinomycetota
GTA
Tyr
>WENV182932256
OKUU01000916
56071
Actinomycetota
TGA
Ser
>WENV182932306
OKUU01001821
147796
Actinomycetota
TAA
Leu
>WENV182932655
OKUU01022674
280470
Actinomycetota
CGT
Thr
>WENV182932651
OKUU01022017
480376
Actinomycetota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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