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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
13 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182933257
OKUV01006788
406350
Verrucomicrobiota
TGT
Thr
>WENV182933295
OKUV01008577
229220
Verrucomicrobiota
CAT
Met
>WENV182933485
OKUV01039615
101463
Verrucomicrobiota
TAA
Leu
>WENV182933328
OKUV01012197
120352
Verrucomicrobiota
TAG
Leu
>WENV182933416
OKUV01024327
292636
Verrucomicrobiota
>WENV182933329
OKUV01012213
406044
Verrucomicrobiota
CTG
Gln
>WENV182933478
OKUV01038066
187556
Verrucomicrobiota
GGG
Pro
>WENV182933490
OKUV01043153
406037
Verrucomicrobiota
GTG
His
>WENV182933429
OKUV01026447
406360
Verrucomicrobiota
GAC
Val
>WENV182933335
OKUV01012583
21159
Verrucomicrobiota
GGA
Ser
>WENV182933200
OKUV01004718
101461
Verrucomicrobiota
GTA
Tyr
>WENV182933397
OKUV01020608
406351
Verrucomicrobiota
GTT
Asn
>WENV182933426
OKUV01026212
8938
Verrucomicrobiota
GCT
Ser
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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