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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
12 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182937989
OKVD01000090
83909
Gammaproteobacteria
CAG
Leu
>WENV182938140
OKVD01000407
83909
Gammaproteobacteria
CAG
Leu
>WENV182938412
OKVD01008187
83909
Gammaproteobacteria
CAG
Leu
>WENV182937805
OKVD01000007
415411
Gammaproteobacteria
TCC
Gly
>WENV182938101
OKVD01000265
178522
Gammaproteobacteria
TCT
Arg
>WENV182937793
OKVD01000005
435648
Gammaproteobacteria
CTG
Gln
>WENV182937794
OKVD01000005
435648
Gammaproteobacteria
CTG
Gln
>WENV182937931
OKVD01000065
435648
Gammaproteobacteria
CTG
Gln
>WENV182937932
OKVD01000065
435648
Gammaproteobacteria
CTG
Gln
>WENV182938091
OKVD01000250
423446
Gammaproteobacteria
CCT
Arg
>WENV182938470
OKVD01014271
178324
Gammaproteobacteria
CCT
Arg
>WENV182938297
OKVD01001949
336795
Gammaproteobacteria
GGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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