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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
38 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182945171
OKVJ01016787
201994
Gammaproteobacteria
TCT
Arg
>WENV182945043
OKVJ01008457
229315
Gammaproteobacteria
GGG
Pro
>WENV182945170
OKVJ01016618
229315
Gammaproteobacteria
GGG
Pro
>WENV182945174
OKVJ01017559
229315
Gammaproteobacteria
GGG
Pro
>WENV182944649
OKVJ01000897
138267
Gammaproteobacteria
GTA
Tyr
>WENV182944922
OKVJ01003860
138267
Gammaproteobacteria
GTA
Tyr
>WENV182945188
OKVJ01021840
65536
Gammaproteobacteria
GGA
Ser
>WENV182944476
OKVJ01000084
93215
Gammaproteobacteria
CAG
Leu
>WENV182944477
OKVJ01000084
93215
Gammaproteobacteria
CAG
Leu
>WENV182944478
OKVJ01000084
93215
Gammaproteobacteria
CAG
Leu
>WENV182945189
OKVJ01021895
93215
Gammaproteobacteria
CAG
Leu
>WENV182945190
OKVJ01021895
93215
Gammaproteobacteria
CAG
Leu
>WENV182945191
OKVJ01021895
93215
Gammaproteobacteria
CAG
Leu
>WENV182944517
OKVJ01000175
139713
Gammaproteobacteria
GTA
Tyr
>WENV182944783
OKVJ01001497
366546
Gammaproteobacteria
GTG
His
>WENV182944869
OKVJ01002317
29456
Gammaproteobacteria
CGA
Ser
>WENV182945034
OKVJ01007906
284052
Gammaproteobacteria
TGT
Thr
>WENV182945233
OKVJ01027263
284052
Gammaproteobacteria
TGT
Thr
>WENV182945221
OKVJ01026266
371122
Gammaproteobacteria
CAT
Met
>WENV182944650
OKVJ01000901
316465
Gammaproteobacteria
CAT
Met
>WENV182944458
OKVJ01000041
282952
Gammaproteobacteria
TCT
Arg
>WENV182945208
OKVJ01025273
185104
Gammaproteobacteria
CAT
Met
>WENV182944560
OKVJ01000325
176034
Gammaproteobacteria
TCT
Arg
>WENV182944617
OKVJ01000617
473724
Gammaproteobacteria
CCT
Arg
>WENV182944989
OKVJ01006205
473724
Gammaproteobacteria
CCT
Arg
>WENV182945150
OKVJ01014661
473724
Gammaproteobacteria
CCT
Arg
>WENV182944403
OKVJ01000006
238652
Gammaproteobacteria
CAT
Met
>WENV182944709
OKVJ01001145
178419
Gammaproteobacteria
GAC
Val
>WENV182944953
OKVJ01004748
209520
Gammaproteobacteria
ACG
Arg
>WENV182944889
OKVJ01002752
476445
Gammaproteobacteria
CTG
Gln
>WENV182944598
OKVJ01000439
476445
Gammaproteobacteria
CTG
Gln
>WENV182944597
OKVJ01000439
476445
Gammaproteobacteria
CTG
Gln
>WENV182944528
OKVJ01000204
476445
Gammaproteobacteria
CTG
Gln
>WENV182944435
OKVJ01000022
476445
Gammaproteobacteria
CTG
Gln
>WENV182944434
OKVJ01000022
476445
Gammaproteobacteria
CTG
Gln
>WENV182944417
OKVJ01000012
476445
Gammaproteobacteria
CTG
Gln
>WENV182944890
OKVJ01002752
476445
Gammaproteobacteria
CTG
Gln
>WENV182945084
OKVJ01010041
476445
Gammaproteobacteria
CTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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