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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
80 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182956113
OKWE01001032
295385
Bacteroidota
CCA
Trp
>WENV182955973
OKWE01000325
117741
Bacteroidota
TAG
Leu
>WENV182956062
OKWE01000704
398829
Bacteroidota
CCT
Arg
>WENV182956025
OKWE01000522
175838
Bacteroidota
GTT
Asn
>WENV182956026
OKWE01000522
175838
Bacteroidota
GTT
Asn
>WENV182955971
OKWE01000320
404226
Bacteroidota
CCT
Arg
>WENV182955799
OKWE01000044
175904
Bacteroidota
CGG
Pro
>WENV182956332
OKWE01005982
289031
Bacteroidota
CAT
Met
>WENV182956043
OKWE01000627
280553
Bacteroidota
TTT
Lys
>WENV182956103
OKWE01000976
280557
Bacteroidota
CAT
Met
>WENV182956415
OKWE01010716
20492
Bacteroidota
GGA
Ser
>WENV182955900
OKWE01000174
20206
Bacteroidota
GGA
Ser
>WENV182956233
OKWE01002866
483416
Bacteroidota
CTG
Gln
>WENV182955972
OKWE01000320
398871
Bacteroidota
TTC
Glu
>WENV182956052
OKWE01000666
201819
Bacteroidota
CAT
Met
>WENV182955934
OKWE01000226
56493
Bacteroidota
TGA
Ser
>WENV182955885
OKWE01000144
56493
Bacteroidota
TGA
Ser
>WENV182955869
OKWE01000120
56493
Bacteroidota
TGA
Ser
>WENV182955932
OKWE01000223
175906
Bacteroidota
GTG
His
>WENV182955870
OKWE01000120
175903
Bacteroidota
GTG
His
>WENV182955796
OKWE01000043
175903
Bacteroidota
GTG
His
>WENV182956308
OKWE01004914
291612
Bacteroidota
>WENV182955772
OKWE01000020
156068
Bacteroidota
TAC
Val
>WENV182955864
OKWE01000107
118089
Bacteroidota
TAG
Leu
>WENV182956376
OKWE01007904
280530
Bacteroidota
CCA
Trp
>WENV182955800
OKWE01000044
280530
Bacteroidota
CCA
Trp
>WENV182955786
OKWE01000032
178907
Bacteroidota
TCT
Arg
>WENV182955827
OKWE01000066
29791
Bacteroidota
GCT
Ser
>WENV182956253
OKWE01003425
182267
Bacteroidota
GTT
Asn
>WENV182955802
OKWE01000044
20449
Bacteroidota
GGA
Ser
>WENV182955857
OKWE01000102
20449
Bacteroidota
GGA
Ser
>WENV182956321
OKWE01005616
178133
Bacteroidota
GAT
Ile
>WENV182955846
OKWE01000089
56072
Bacteroidota
TAA
Leu
>WENV182956135
OKWE01001275
57807
Bacteroidota
TGA
Ser
>WENV182956431
OKWE01013290
175886
Bacteroidota
GGC
Ala
>WENV182955908
OKWE01000180
175902
Bacteroidota
GGC
Ala
>WENV182956382
OKWE01008312
179697
Bacteroidota
TGT
Thr
>WENV182955828
OKWE01000066
398860
Bacteroidota
CTC
Glu
>WENV182956289
OKWE01004216
480404
Bacteroidota
TTG
Gln
>WENV182955865
OKWE01000109
280451
Bacteroidota
CGT
Thr
>WENV182955880
OKWE01000134
99847
Bacteroidota
GTA
Tyr
>WENV182955793
OKWE01000041
99847
Bacteroidota
GTA
Tyr
>WENV182955769
OKWE01000017
399200
Bacteroidota
CAT
Met
>WENV182955783
OKWE01000030
399200
Bacteroidota
CAT
Met
>WENV182955912
OKWE01000184
399200
Bacteroidota
CAT
Met
>WENV182956064
OKWE01000712
399200
Bacteroidota
CAT
Met
>WENV182956336
OKWE01006169
186874
Bacteroidota
CAT
Met
>WENV182955919
OKWE01000189
332896
Bacteroidota
TTT
Lys
>WENV182955874
OKWE01000126
332896
Bacteroidota
TTT
Lys
>WENV182955826
OKWE01000066
332896
Bacteroidota
TTT
Lys
>WENV182955899
OKWE01000174
488746
Bacteroidota
CTG
Gln
>WENV182956210
OKWE01002278
186108
Bacteroidota
GTT
Asn
>WENV182955858
OKWE01000104
187400
Bacteroidota
GTT
Asn
>WENV182955879
OKWE01000133
175844
Bacteroidota
GGC
Ala
>WENV182955875
OKWE01000128
175844
Bacteroidota
GGC
Ala
>WENV182955877
OKWE01000132
73011
Bacteroidota
CAA
Leu
>WENV182956259
OKWE01003717
183889
Bacteroidota
GGC
Ala
>WENV182956411
OKWE01010088
480318
Bacteroidota
CTG
Gln
>WENV182955837
OKWE01000078
158068
Bacteroidota
GGG
Pro
>WENV182956482
OKWE01018978
186142
Bacteroidota
GAT
Ile
>WENV182955774
OKWE01000022
398828
Bacteroidota
CCG
Arg
>WENV182955797
OKWE01000044
74084
Bacteroidota
CAG
Leu
>WENV182955771
OKWE01000018
480325
Bacteroidota
CTG
Gln
>WENV182955896
OKWE01000171
140771
Bacteroidota
>WENV182955893
OKWE01000171
140771
Bacteroidota
>WENV182955928
OKWE01000203
176192
Bacteroidota
TCT
Arg
>WENV182955813
OKWE01000057
176192
Bacteroidota
TCT
Arg
>WENV182956534
OKWE01033946
280446
Bacteroidota
TTT
Lys
>WENV182955804
OKWE01000046
280446
Bacteroidota
TTT
Lys
>WENV182956101
OKWE01000971
484496
Bacteroidota
TTG
Gln
>WENV182956092
OKWE01000901
484496
Bacteroidota
TTG
Gln
>WENV182956048
OKWE01000634
484496
Bacteroidota
TTG
Gln
>WENV182955787
OKWE01000032
285750
Bacteroidota
CCC
Gly
>WENV182955770
OKWE01000017
285750
Bacteroidota
CCC
Gly
>WENV182956288
OKWE01004209
188555
Bacteroidota
CAT
Met
>WENV182956483
OKWE01018978
186143
Bacteroidota
TGC
Ala
>WENV182955955
OKWE01000277
398836
Bacteroidota
GCA
Cys
>WENV182955940
OKWE01000235
398836
Bacteroidota
GCA
Cys
>WENV182955762
OKWE01000009
398836
Bacteroidota
GCA
Cys
>WENV182955751
OKWE01000003
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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