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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
39 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182977962
OKYG01000010
117741
Bacteroidota
TAG
Leu
>WENV182977968
OKYG01000028
175838
Bacteroidota
GTT
Asn
>WENV182977969
OKYG01000028
175838
Bacteroidota
GTT
Asn
>WENV182978159
OKYG01016165
175904
Bacteroidota
CGG
Pro
>WENV182977960
OKYG01000007
280557
Bacteroidota
CAT
Met
>WENV182978060
OKYG01002003
20492
Bacteroidota
GGA
Ser
>WENV182977967
OKYG01000025
20206
Bacteroidota
GGA
Ser
>WENV182977993
OKYG01000182
201819
Bacteroidota
CAT
Met
>WENV182977971
OKYG01000048
175903
Bacteroidota
GTG
His
>WENV182978019
OKYG01000348
351598
Bacteroidota
CGG
Pro
>WENV182978084
OKYG01004297
118089
Bacteroidota
TAG
Leu
>WENV182978092
OKYG01005258
175936
Bacteroidota
CAT
Met
>WENV182978053
OKYG01001549
203954
Bacteroidota
GTC
Asp
>WENV182978152
OKYG01013936
178907
Bacteroidota
TCT
Arg
>WENV182978165
OKYG01018095
29791
Bacteroidota
GCT
Ser
>WENV182978091
OKYG01004938
20449
Bacteroidota
GGA
Ser
>WENV182978025
OKYG01000463
56072
Bacteroidota
TAA
Leu
>WENV182977983
OKYG01000090
57807
Bacteroidota
TGA
Ser
>WENV182978033
OKYG01000578
175902
Bacteroidota
GGC
Ala
>WENV182978061
OKYG01002028
480404
Bacteroidota
TTG
Gln
>WENV182977970
OKYG01000047
280451
Bacteroidota
CGT
Thr
>WENV182977966
OKYG01000025
488746
Bacteroidota
CTG
Gln
>WENV182978038
OKYG01000754
399026
Bacteroidota
CCT
Arg
>WENV182978075
OKYG01003140
280478
Bacteroidota
GCC
Gly
>WENV182978058
OKYG01001788
20766
Bacteroidota
GGA
Ser
>WENV182978054
OKYG01001579
280532
Bacteroidota
>WENV182978057
OKYG01001739
229246
Bacteroidota
GGC
Ala
>WENV182978157
OKYG01015347
73011
Bacteroidota
CAA
Leu
>WENV182978087
OKYG01004551
480318
Bacteroidota
CTG
Gln
>WENV182978020
OKYG01000366
398828
Bacteroidota
CCG
Arg
>WENV182978090
OKYG01004814
74084
Bacteroidota
CAG
Leu
>WENV182978055
OKYG01001683
159415
Bacteroidota
TAC
Val
>WENV182978094
OKYG01005442
480325
Bacteroidota
CTG
Gln
>WENV182978093
OKYG01005294
400088
Bacteroidota
GGT
Thr
>WENV182978077
OKYG01003847
484496
Bacteroidota
TTG
Gln
>WENV182977956
OKYG01000001
484496
Bacteroidota
TTG
Gln
>WENV182978095
OKYG01005802
285750
Bacteroidota
CCC
Gly
>WENV182978141
OKYG01012220
117804
Bacteroidota
TAG
Leu
>WENV182978011
OKYG01000311
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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