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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
33 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182981169
OKYU01015181
405363
Bacillota
GCA
Cys
>WENV182981022
OKYU01000512
280428
Bacillota
GAA
Phe
>WENV182981155
OKYU01012414
179563
Bacillota
GAT
Ile
>WENV182981075
OKYU01002890
190476
Bacillota
CAT
Met
>WENV182981100
OKYU01005172
82124
Bacillota
TAA
Leu
>WENV182981029
OKYU01000669
280447
Bacillota
GAC
Val
>WENV182981037
OKYU01000833
5692
Bacillota
GCT
Ser
>WENV182981164
OKYU01014464
284723
Bacillota
TAC
Val
>WENV182981073
OKYU01002785
73009
Bacillota
CAG
Leu
>WENV182981110
OKYU01006776
407726
Bacillota
CTG
Gln
>WENV182981027
OKYU01000602
291581
Bacillota
CGG
Pro
>WENV182981015
OKYU01000384
175859
Bacillota
TCT
Arg
>WENV182981163
OKYU01014464
175847
Bacillota
GTC
Asp
>WENV182981047
OKYU01001283
179810
Bacillota
TCT
Arg
>WENV182981151
OKYU01012338
284627
Bacillota
GAA
Phe
>WENV182981207
OKYU01025547
187364
Bacillota
CAT
Met
>WENV182981080
OKYU01003284
322848
Bacillota
CTT
Lys
>WENV182981186
OKYU01019509
291576
Bacillota
CCC
Gly
>WENV182981017
OKYU01000439
480324
Bacillota
TTG
Gln
>WENV182981125
OKYU01008198
175899
Bacillota
GTC
Asp
>WENV182981030
OKYU01000708
483485
Bacillota
CCC
Gly
>WENV182981023
OKYU01000512
321753
Bacillota
GCC
Gly
>WENV182981028
OKYU01000656
179755
Bacillota
CCG
Arg
>WENV182981076
OKYU01002890
398832
Bacillota
TTC
Glu
>WENV182981099
OKYU01005172
118669
Bacillota
GTA
Tyr
>WENV182981025
OKYU01000549
118669
Bacillota
GTA
Tyr
>WENV182981144
OKYU01011184
398852
Bacillota
CTC
Glu
>WENV182981091
OKYU01004128
309916
Bacillota
TTT
Lys
>WENV182981048
OKYU01001283
175857
Bacillota
GTG
His
>WENV182981101
OKYU01005443
398833
Bacillota
TGT
Thr
>WENV182981132
OKYU01009069
280486
Bacillota
TGC
Ala
>WENV182981036
OKYU01000833
56074
Bacillota
TGA
Ser
>WENV182981087
OKYU01004010
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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