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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
22 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182986644
OKZX01000073
99852
Bacillota
GTA
Tyr
>WENV182986671
OKZX01000804
349107
Bacillota
GCC
Gly
>WENV182986686
OKZX01001820
280428
Bacillota
GAA
Phe
>WENV182986747
OKZX01009643
48505
Bacillota
TGA
Ser
>WENV182986663
OKZX01000460
175842
Bacillota
CAC
Val
>WENV182986672
OKZX01000823
190476
Bacillota
CAT
Met
>WENV182986680
OKZX01001378
280447
Bacillota
GAC
Val
>WENV182986699
OKZX01002254
5692
Bacillota
GCT
Ser
>WENV182986720
OKZX01005149
73009
Bacillota
CAG
Leu
>WENV182986670
OKZX01000761
175831
Bacillota
ACG
Arg
>WENV182986651
OKZX01000173
175868
Bacillota
GTT
Asn
>WENV182986650
OKZX01000173
398854
Bacillota
CTC
Glu
>WENV182986687
OKZX01001883
291576
Bacillota
CCC
Gly
>WENV182986744
OKZX01008971
280444
Bacillota
GGT
Thr
>WENV182986697
OKZX01002238
179755
Bacillota
CCG
Arg
>WENV182986673
OKZX01000823
398832
Bacillota
TTC
Glu
>WENV182986730
OKZX01007018
175915
Bacillota
GTC
Asp
>WENV182986753
OKZX01010139
175857
Bacillota
GTG
His
>WENV182986703
OKZX01002922
398833
Bacillota
TGT
Thr
>WENV182986712
OKZX01003401
175849
Bacillota
GTC
Asp
>WENV182986698
OKZX01002254
56074
Bacillota
TGA
Ser
>WENV182986700
OKZX01002439
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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