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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
43 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182987065
OLAB01000081
117741
Bacteroidota
TAG
Leu
>WENV182987105
OLAB01000430
398829
Bacteroidota
CCT
Arg
>WENV182987052
OLAB01000039
175838
Bacteroidota
GTT
Asn
>WENV182987053
OLAB01000039
175838
Bacteroidota
GTT
Asn
>WENV182987246
OLAB01013403
175904
Bacteroidota
CGG
Pro
>WENV182987036
OLAB01000002
280557
Bacteroidota
CAT
Met
>WENV182987102
OLAB01000392
20492
Bacteroidota
GGA
Ser
>WENV182987059
OLAB01000052
20206
Bacteroidota
GGA
Ser
>WENV182987185
OLAB01004563
398871
Bacteroidota
TTC
Glu
>WENV182987080
OLAB01000199
201819
Bacteroidota
CAT
Met
>WENV182987162
OLAB01002767
56493
Bacteroidota
TGA
Ser
>WENV182987164
OLAB01002986
175906
Bacteroidota
GTG
His
>WENV182987060
OLAB01000057
175903
Bacteroidota
GTG
His
>WENV182987266
OLAB01017161
118089
Bacteroidota
TAG
Leu
>WENV182987180
OLAB01004158
280530
Bacteroidota
CCA
Trp
>WENV182987131
OLAB01001195
175936
Bacteroidota
CAT
Met
>WENV182987201
OLAB01005148
178907
Bacteroidota
TCT
Arg
>WENV182987188
OLAB01004757
20449
Bacteroidota
GGA
Ser
>WENV182987068
OLAB01000112
56072
Bacteroidota
TAA
Leu
>WENV182987156
OLAB01002112
175902
Bacteroidota
GGC
Ala
>WENV182987129
OLAB01001100
480404
Bacteroidota
TTG
Gln
>WENV182987096
OLAB01000322
280451
Bacteroidota
CGT
Thr
>WENV182987139
OLAB01001497
399200
Bacteroidota
CAT
Met
>WENV182987045
OLAB01000021
332896
Bacteroidota
TTT
Lys
>WENV182987058
OLAB01000052
488746
Bacteroidota
CTG
Gln
>WENV182987127
OLAB01000951
399026
Bacteroidota
CCT
Arg
>WENV182987178
OLAB01004102
280478
Bacteroidota
GCC
Gly
>WENV182987208
OLAB01006367
186108
Bacteroidota
GTT
Asn
>WENV182987143
OLAB01001716
280532
Bacteroidota
>WENV182987175
OLAB01004008
73011
Bacteroidota
CAA
Leu
>WENV182987144
OLAB01001837
480318
Bacteroidota
CTG
Gln
>WENV182987145
OLAB01001842
158068
Bacteroidota
GGG
Pro
>WENV182987041
OLAB01000010
398828
Bacteroidota
CCG
Arg
>WENV182987181
OLAB01004271
74084
Bacteroidota
CAG
Leu
>WENV182987176
OLAB01004012
159415
Bacteroidota
TAC
Val
>WENV182987221
OLAB01008751
480325
Bacteroidota
CTG
Gln
>WENV182987165
OLAB01003055
176192
Bacteroidota
TCT
Arg
>WENV182987072
OLAB01000132
280446
Bacteroidota
TTT
Lys
>WENV182987048
OLAB01000032
280446
Bacteroidota
TTT
Lys
>WENV182987093
OLAB01000277
484496
Bacteroidota
TTG
Gln
>WENV182987213
OLAB01007029
117804
Bacteroidota
TAG
Leu
>WENV182987150
OLAB01001928
398836
Bacteroidota
GCA
Cys
>WENV182987148
OLAB01001879
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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