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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
25 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182988980
OLAH01000103
295385
Bacteroidota
CCA
Trp
>WENV182988961
OLAH01000034
117741
Bacteroidota
TAG
Leu
>WENV182988937
OLAH01000002
175838
Bacteroidota
GTT
Asn
>WENV182988970
OLAH01000055
280557
Bacteroidota
CAT
Met
>WENV182989036
OLAH01001638
20492
Bacteroidota
GGA
Ser
>WENV182988945
OLAH01000007
20206
Bacteroidota
GGA
Ser
>WENV182988939
OLAH01000004
175903
Bacteroidota
GTG
His
>WENV182988953
OLAH01000016
56072
Bacteroidota
TAA
Leu
>WENV182988955
OLAH01000018
175902
Bacteroidota
GGC
Ala
>WENV182989072
OLAH01009753
480404
Bacteroidota
TTG
Gln
>WENV182988936
OLAH01000001
280451
Bacteroidota
CGT
Thr
>WENV182988943
OLAH01000005
99847
Bacteroidota
GTA
Tyr
>WENV182989049
OLAH01003244
332896
Bacteroidota
TTT
Lys
>WENV182988944
OLAH01000007
488746
Bacteroidota
CTG
Gln
>WENV182989057
OLAH01005751
399026
Bacteroidota
CCT
Arg
>WENV182989032
OLAH01001212
175844
Bacteroidota
GGC
Ala
>WENV182988948
OLAH01000013
158068
Bacteroidota
GGG
Pro
>WENV182988946
OLAH01000007
158068
Bacteroidota
GGG
Pro
>WENV182988935
OLAH01000001
398828
Bacteroidota
CCG
Arg
>WENV182989068
OLAH01009727
176192
Bacteroidota
TCT
Arg
>WENV182989017
OLAH01000480
280446
Bacteroidota
TTT
Lys
>WENV182988942
OLAH01000005
280446
Bacteroidota
TTT
Lys
>WENV182988981
OLAH01000127
484496
Bacteroidota
TTG
Gln
>WENV182988947
OLAH01000008
484496
Bacteroidota
TTG
Gln
>WENV182988967
OLAH01000047
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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