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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
36 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182989142
OLAI01000216
117741
Bacteroidota
TAG
Leu
>WENV182989106
OLAI01000027
175838
Bacteroidota
GTT
Asn
>WENV182989389
OLAI01017072
175904
Bacteroidota
CGG
Pro
>WENV182989102
OLAI01000025
400161
Bacteroidota
GGT
Thr
>WENV182989178
OLAI01000421
289031
Bacteroidota
CAT
Met
>WENV182989111
OLAI01000046
280553
Bacteroidota
TTT
Lys
>WENV182989130
OLAI01000111
280557
Bacteroidota
CAT
Met
>WENV182989131
OLAI01000114
20206
Bacteroidota
GGA
Ser
>WENV182989369
OLAI01014597
483416
Bacteroidota
CTG
Gln
>WENV182989350
OLAI01010910
398871
Bacteroidota
TTC
Glu
>WENV182989087
OLAI01000005
118221
Bacteroidota
CAA
Leu
>WENV182989104
OLAI01000026
56493
Bacteroidota
TGA
Ser
>WENV182989123
OLAI01000082
175903
Bacteroidota
GTG
His
>WENV182989342
OLAI01008939
118089
Bacteroidota
TAG
Leu
>WENV182989113
OLAI01000048
56385
Bacteroidota
TGA
Ser
>WENV182989405
OLAI01020948
182267
Bacteroidota
GTT
Asn
>WENV182989103
OLAI01000025
312035
Bacteroidota
CCA
Trp
>WENV182989134
OLAI01000158
57807
Bacteroidota
TGA
Ser
>WENV182989157
OLAI01000360
175902
Bacteroidota
GGC
Ala
>WENV182989090
OLAI01000006
280451
Bacteroidota
CGT
Thr
>WENV182989126
OLAI01000088
404109
Bacteroidota
CTC
Glu
>WENV182989125
OLAI01000088
404109
Bacteroidota
CTC
Glu
>WENV182989161
OLAI01000388
186874
Bacteroidota
CAT
Met
>WENV182989085
OLAI01000004
46648
Bacteroidota
TAA
Leu
>WENV182989094
OLAI01000016
488746
Bacteroidota
CTG
Gln
>WENV182989079
OLAI01000001
187814
Bacteroidota
GTC
Asp
>WENV182989078
OLAI01000001
187814
Bacteroidota
GTC
Asp
>WENV182989095
OLAI01000016
158068
Bacteroidota
GGG
Pro
>WENV182989096
OLAI01000017
398828
Bacteroidota
CCG
Arg
>WENV182989329
OLAI01007298
74084
Bacteroidota
CAG
Leu
>WENV182989194
OLAI01000609
140771
Bacteroidota
>WENV182989084
OLAI01000004
481328
Bacteroidota
TTG
Gln
>WENV182989385
OLAI01016585
280446
Bacteroidota
TTT
Lys
>WENV182989314
OLAI01006103
280446
Bacteroidota
TTT
Lys
>WENV182989116
OLAI01000061
484496
Bacteroidota
TTG
Gln
>WENV182989098
OLAI01000020
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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