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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
32 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182990593
OLAN01000016
117741
Bacteroidota
TAG
Leu
>WENV182990584
OLAN01000004
398829
Bacteroidota
CCT
Arg
>WENV182990614
OLAN01000053
175838
Bacteroidota
GTT
Asn
>WENV182990613
OLAN01000051
289031
Bacteroidota
CAT
Met
>WENV182990625
OLAN01000109
280557
Bacteroidota
CAT
Met
>WENV182990588
OLAN01000010
20206
Bacteroidota
GGA
Ser
>WENV182990676
OLAN01000527
483416
Bacteroidota
CTG
Gln
>WENV182990631
OLAN01000150
56493
Bacteroidota
TGA
Ser
>WENV182990602
OLAN01000044
175903
Bacteroidota
GTG
His
>WENV182990668
OLAN01000370
351598
Bacteroidota
CGG
Pro
>WENV182990822
OLAN01010048
29791
Bacteroidota
GCT
Ser
>WENV182990802
OLAN01008303
182267
Bacteroidota
GTT
Asn
>WENV182990869
OLAN01018502
175886
Bacteroidota
GGC
Ala
>WENV182990651
OLAN01000277
175902
Bacteroidota
GGC
Ala
>WENV182990896
OLAN01023201
179697
Bacteroidota
TGT
Thr
>WENV182990823
OLAN01010048
398860
Bacteroidota
CTC
Glu
>WENV182990592
OLAN01000013
280451
Bacteroidota
CGT
Thr
>WENV182990872
OLAN01018757
418894
Bacteroidota
TTC
Glu
>WENV182990644
OLAN01000227
99847
Bacteroidota
GTA
Tyr
>WENV182990629
OLAN01000136
186874
Bacteroidota
CAT
Met
>WENV182990587
OLAN01000010
488746
Bacteroidota
CTG
Gln
>WENV182990827
OLAN01011108
175844
Bacteroidota
GGC
Ala
>WENV182990582
OLAN01000001
398828
Bacteroidota
CCG
Arg
>WENV182990842
OLAN01013291
176192
Bacteroidota
TCT
Arg
>WENV182990591
OLAN01000012
69204
Bacteroidota
TGA
Ser
>WENV182990589
OLAN01000011
69204
Bacteroidota
TGA
Ser
>WENV182990583
OLAN01000002
484496
Bacteroidota
TTG
Gln
>WENV182990585
OLAN01000005
27502
Bacteroidota
GGA
Ser
>WENV182990763
OLAN01004627
365112
Bacteroidota
TTT
Lys
>WENV182990619
OLAN01000073
398836
Bacteroidota
GCA
Cys
>WENV182990597
OLAN01000034
398836
Bacteroidota
GCA
Cys
>WENV182990683
OLAN01000581
170323
Bacteroidota
GGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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