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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
27 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182991535
OLAQ01002262
99852
Bacillota
GTA
Tyr
>WENV182991503
OLAQ01000281
349107
Bacillota
GCC
Gly
>WENV182991504
OLAQ01000281
405363
Bacillota
GCA
Cys
>WENV182991502
OLAQ01000281
280428
Bacillota
GAA
Phe
>WENV182991500
OLAQ01000201
280492
Bacillota
CTT
Lys
>WENV182991519
OLAQ01000570
190476
Bacillota
CAT
Met
>WENV182991515
OLAQ01000489
73664
Bacillota
CAG
Leu
>WENV182991499
OLAQ01000144
280447
Bacillota
GAC
Val
>WENV182991508
OLAQ01000396
5692
Bacillota
GCT
Ser
>WENV182991551
OLAQ01003555
73009
Bacillota
CAG
Leu
>WENV182991549
OLAQ01003555
175859
Bacillota
TCT
Arg
>WENV182991572
OLAQ01007903
480322
Bacillota
CTG
Gln
>WENV182991491
OLAQ01000026
175868
Bacillota
GTT
Asn
>WENV182991490
OLAQ01000026
398854
Bacillota
CTC
Glu
>WENV182991556
OLAQ01004279
480324
Bacillota
TTG
Gln
>WENV182991522
OLAQ01000779
56079
Bacillota
AAG
Leu
>WENV182991544
OLAQ01002498
117745
Bacillota
GTA
Tyr
>WENV182991518
OLAQ01000529
280444
Bacillota
GGT
Thr
>WENV182991521
OLAQ01000748
46643
Bacillota
TGA
Ser
>WENV182991520
OLAQ01000570
398832
Bacillota
TTC
Glu
>WENV182991563
OLAQ01006166
280462
Bacillota
GAA
Phe
>WENV182991526
OLAQ01000927
398852
Bacillota
CTC
Glu
>WENV182991554
OLAQ01003854
398833
Bacillota
TGT
Thr
>WENV182991517
OLAQ01000529
175849
Bacillota
GTC
Asp
>WENV182991564
OLAQ01006166
280463
Bacillota
TTT
Lys
>WENV182991507
OLAQ01000396
56074
Bacillota
TGA
Ser
>WENV182991546
OLAQ01002825
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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