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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
49 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV182994066
OLBB01003304
99852
Bacillota
GTA
Tyr
>WENV182994017
OLBB01001645
343590
Bacillota
GCC
Gly
>WENV182994071
OLBB01003723
349107
Bacillota
GCC
Gly
>WENV182994072
OLBB01003723
405363
Bacillota
GCA
Cys
>WENV182994154
OLBB01013601
480359
Bacillota
TCC
Gly
>WENV182994011
OLBB01001511
280492
Bacillota
CTT
Lys
>WENV182993936
OLBB01000209
280492
Bacillota
CTT
Lys
>WENV182994031
OLBB01002095
175842
Bacillota
CAC
Val
>WENV182994003
OLBB01001258
236579
Bacillota
GAT
Ile
>WENV182994028
OLBB01001983
179176
Bacillota
ACG
Arg
>WENV182994002
OLBB01001258
295166
Bacillota
TGC
Ala
>WENV182993913
OLBB01000072
82124
Bacillota
TAA
Leu
>WENV182993951
OLBB01000394
73664
Bacillota
CAG
Leu
>WENV182993897
OLBB01000024
73664
Bacillota
CAG
Leu
>WENV182993935
OLBB01000205
280447
Bacillota
GAC
Val
>WENV182993903
OLBB01000038
73009
Bacillota
CAG
Leu
>WENV182993976
OLBB01000783
291581
Bacillota
CGG
Pro
>WENV182993952
OLBB01000398
175859
Bacillota
TCT
Arg
>WENV182993967
OLBB01000586
175831
Bacillota
ACG
Arg
>WENV182993917
OLBB01000072
179810
Bacillota
TCT
Arg
>WENV182994057
OLBB01002859
27216
Bacillota
GCT
Ser
>WENV182993975
OLBB01000783
480322
Bacillota
CTG
Gln
>WENV182993948
OLBB01000353
175868
Bacillota
GTT
Asn
>WENV182993927
OLBB01000142
398854
Bacillota
CTC
Glu
>WENV182994013
OLBB01001519
291576
Bacillota
CCC
Gly
>WENV182994034
OLBB01002276
480324
Bacillota
TTG
Gln
>WENV182993942
OLBB01000282
497729
Bacillota
CCA
Trp
>WENV182994008
OLBB01001317
56079
Bacillota
AAG
Leu
>WENV182993996
OLBB01001198
117745
Bacillota
GTA
Tyr
>WENV182994135
OLBB01010126
483485
Bacillota
CCC
Gly
>WENV182993925
OLBB01000137
46643
Bacillota
TGA
Ser
>WENV182993930
OLBB01000156
179755
Bacillota
CCG
Arg
>WENV182994001
OLBB01001237
46835
Bacillota
TAA
Leu
>WENV182993904
OLBB01000043
118669
Bacillota
GTA
Tyr
>WENV182993912
OLBB01000072
118669
Bacillota
GTA
Tyr
>WENV182993921
OLBB01000080
280462
Bacillota
GAA
Phe
>WENV182993984
OLBB01000949
398852
Bacillota
CTC
Glu
>WENV182993902
OLBB01000035
398852
Bacillota
CTC
Glu
>WENV182993888
OLBB01000001
398852
Bacillota
CTC
Glu
>WENV182993887
OLBB01000001
398852
Bacillota
CTC
Glu
>WENV182993886
OLBB01000001
398852
Bacillota
CTC
Glu
>WENV182994006
OLBB01001310
280483
Bacillota
GAA
Phe
>WENV182993918
OLBB01000072
175857
Bacillota
GTG
His
>WENV182994007
OLBB01001310
285756
Bacillota
GCC
Gly
>WENV182993978
OLBB01000847
398833
Bacillota
TGT
Thr
>WENV182994127
OLBB01008713
175849
Bacillota
GTC
Asp
>WENV182994110
OLBB01006807
280463
Bacillota
TTT
Lys
>WENV182993988
OLBB01001021
56074
Bacillota
TGA
Ser
>WENV182993924
OLBB01000098
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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