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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
34 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183001858
OLCM01000090
117741
Bacteroidota
TAG
Leu
>WENV183001816
OLCM01000005
398829
Bacteroidota
CCT
Arg
>WENV183001815
OLCM01000005
175838
Bacteroidota
GTT
Asn
>WENV183001971
OLCM01004972
404226
Bacteroidota
CCT
Arg
>WENV183001804
OLCM01000001
289031
Bacteroidota
CAT
Met
>WENV183001837
OLCM01000030
280557
Bacteroidota
CAT
Met
>WENV183001863
OLCM01000109
20206
Bacteroidota
GGA
Ser
>WENV183001856
OLCM01000081
483416
Bacteroidota
CTG
Gln
>WENV183001934
OLCM01001967
398871
Bacteroidota
TTC
Glu
>WENV183001817
OLCM01000007
56493
Bacteroidota
TGA
Ser
>WENV183001851
OLCM01000063
175903
Bacteroidota
GTG
His
>WENV183001972
OLCM01005012
118089
Bacteroidota
TAG
Leu
>WENV183001821
OLCM01000009
405877
Bacteroidota
GGT
Thr
>WENV183001914
OLCM01000840
182267
Bacteroidota
GTT
Asn
>WENV183002010
OLCM01010660
20449
Bacteroidota
GGA
Ser
>WENV183001864
OLCM01000111
21127
Bacteroidota
GGA
Ser
>WENV183001814
OLCM01000005
56072
Bacteroidota
TAA
Leu
>WENV183001832
OLCM01000023
57807
Bacteroidota
TGA
Ser
>WENV183001966
OLCM01004494
175886
Bacteroidota
GGC
Ala
>WENV183001829
OLCM01000018
175902
Bacteroidota
GGC
Ala
>WENV183001850
OLCM01000059
280451
Bacteroidota
CGT
Thr
>WENV183001872
OLCM01000150
99847
Bacteroidota
GTA
Tyr
>WENV183001986
OLCM01006842
399200
Bacteroidota
CAT
Met
>WENV183001841
OLCM01000035
186874
Bacteroidota
CAT
Met
>WENV183001826
OLCM01000013
488746
Bacteroidota
CTG
Gln
>WENV183001948
OLCM01003064
280478
Bacteroidota
GCC
Gly
>WENV183001866
OLCM01000120
158068
Bacteroidota
GGG
Pro
>WENV183001824
OLCM01000013
158068
Bacteroidota
GGG
Pro
>WENV183001938
OLCM01002420
186142
Bacteroidota
GAT
Ile
>WENV183001827
OLCM01000015
398828
Bacteroidota
CCG
Arg
>WENV183001825
OLCM01000013
280446
Bacteroidota
TTT
Lys
>WENV183001849
OLCM01000055
484496
Bacteroidota
TTG
Gln
>WENV183001939
OLCM01002420
186143
Bacteroidota
TGC
Ala
>WENV183001875
OLCM01000155
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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