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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
50 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183008057
OLDK01001505
99852
Bacillota
GTA
Tyr
>WENV183007926
OLDK01000015
349107
Bacillota
GCC
Gly
>WENV183007930
OLDK01000015
349107
Bacillota
GCC
Gly
>WENV183007947
OLDK01000028
349107
Bacillota
GCC
Gly
>WENV183007948
OLDK01000028
349107
Bacillota
GCC
Gly
>WENV183007949
OLDK01000028
405363
Bacillota
GCA
Cys
>WENV183007929
OLDK01000015
280428
Bacillota
GAA
Phe
>WENV183007946
OLDK01000028
280428
Bacillota
GAA
Phe
>WENV183008041
OLDK01000932
408526
Bacillota
GCA
Cys
>WENV183008026
OLDK01000390
296855
Bacillota
GGT
Thr
>WENV183008060
OLDK01001548
48505
Bacillota
TGA
Ser
>WENV183007927
OLDK01000015
280466
Bacillota
TAC
Val
>WENV183007966
OLDK01000063
175842
Bacillota
CAC
Val
>WENV183008043
OLDK01001026
20932
Bacillota
GCT
Ser
>WENV183008039
OLDK01000932
291553
Bacillota
GAA
Phe
>WENV183007939
OLDK01000023
190476
Bacillota
CAT
Met
>WENV183008104
OLDK01008036
482593
Bacillota
CCC
Gly
>WENV183008021
OLDK01000386
339995
Bacillota
TGC
Ala
>WENV183007912
OLDK01000007
280447
Bacillota
GAC
Val
>WENV183007917
OLDK01000007
5692
Bacillota
GCT
Ser
>WENV183007993
OLDK01000132
73009
Bacillota
CAG
Leu
>WENV183007981
OLDK01000092
291581
Bacillota
CGG
Pro
>WENV183008001
OLDK01000166
175859
Bacillota
TCT
Arg
>WENV183008015
OLDK01000340
21311
Bacillota
GCT
Ser
>WENV183007941
OLDK01000023
175831
Bacillota
ACG
Arg
>WENV183008027
OLDK01000390
184495
Bacillota
CAT
Met
>WENV183007980
OLDK01000092
480322
Bacillota
CTG
Gln
>WENV183007888
OLDK01000001
480322
Bacillota
CTG
Gln
>WENV183007933
OLDK01000017
175868
Bacillota
GTT
Asn
>WENV183007909
OLDK01000007
175868
Bacillota
GTT
Asn
>WENV183007908
OLDK01000007
398854
Bacillota
CTC
Glu
>WENV183007931
OLDK01000015
291576
Bacillota
CCC
Gly
>WENV183007919
OLDK01000009
480324
Bacillota
TTG
Gln
>WENV183008107
OLDK01008196
497729
Bacillota
CCA
Trp
>WENV183007915
OLDK01000007
280444
Bacillota
GGT
Thr
>WENV183007911
OLDK01000007
280444
Bacillota
GGT
Thr
>WENV183008069
OLDK01002793
119459
Bacillota
TAG
Leu
>WENV183007938
OLDK01000023
179755
Bacillota
CCG
Arg
>WENV183008038
OLDK01000932
280547
Bacillota
GTC
Asp
>WENV183008040
OLDK01000932
445407
Bacillota
GCC
Gly
>WENV183008017
OLDK01000347
46835
Bacillota
TAA
Leu
>WENV183007940
OLDK01000023
398832
Bacillota
TTC
Glu
>WENV183008016
OLDK01000347
175915
Bacillota
GTC
Asp
>WENV183008055
OLDK01001435
280476
Bacillota
TTT
Lys
>WENV183008072
OLDK01003330
20943
Bacillota
CGA
Ser
>WENV183007928
OLDK01000015
175849
Bacillota
GTC
Asp
>WENV183007914
OLDK01000007
175849
Bacillota
GTC
Asp
>WENV183008109
OLDK01008848
179166
Bacillota
TCT
Arg
>WENV183007916
OLDK01000007
56074
Bacillota
TGA
Ser
>WENV183007979
OLDK01000092
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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