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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
53 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183008697
OLDN01000033
285360
Bacteroidota
TTT
Lys
>WENV183008719
OLDN01000104
285360
Bacteroidota
TTT
Lys
>WENV183008745
OLDN01000313
117741
Bacteroidota
TAG
Leu
>WENV183008676
OLDN01000007
398829
Bacteroidota
CCT
Arg
>WENV183008709
OLDN01000088
175838
Bacteroidota
GTT
Asn
>WENV183008710
OLDN01000088
175838
Bacteroidota
GTT
Asn
>WENV183008827
OLDN01001877
289031
Bacteroidota
CAT
Met
>WENV183008728
OLDN01000159
280557
Bacteroidota
CAT
Met
>WENV183008700
OLDN01000053
280557
Bacteroidota
CAT
Met
>WENV183008665
OLDN01000002
20206
Bacteroidota
GGA
Ser
>WENV183008849
OLDN01002882
483416
Bacteroidota
CTG
Gln
>WENV183008689
OLDN01000017
56493
Bacteroidota
TGA
Ser
>WENV183008690
OLDN01000017
175903
Bacteroidota
GTG
His
>WENV183008672
OLDN01000005
351598
Bacteroidota
CGG
Pro
>WENV183008902
OLDN01008399
291612
Bacteroidota
>WENV183008743
OLDN01000290
175936
Bacteroidota
CAT
Met
>WENV183008952
OLDN01015548
405877
Bacteroidota
GGT
Thr
>WENV183008740
OLDN01000256
57807
Bacteroidota
TGA
Ser
>WENV183008680
OLDN01000009
57807
Bacteroidota
TGA
Ser
>WENV183008714
OLDN01000091
175902
Bacteroidota
GGC
Ala
>WENV183008716
OLDN01000097
480404
Bacteroidota
TTG
Gln
>WENV183008725
OLDN01000121
280451
Bacteroidota
CGT
Thr
>WENV183008731
OLDN01000180
99847
Bacteroidota
GTA
Tyr
>WENV183008794
OLDN01000956
186874
Bacteroidota
CAT
Met
>WENV183008803
OLDN01001069
332896
Bacteroidota
TTT
Lys
>WENV183008773
OLDN01000663
332896
Bacteroidota
TTT
Lys
>WENV183008664
OLDN01000002
488746
Bacteroidota
CTG
Gln
>WENV183008707
OLDN01000085
399026
Bacteroidota
CCT
Arg
>WENV183008736
OLDN01000218
20766
Bacteroidota
GGA
Ser
>WENV183008936
OLDN01013033
186108
Bacteroidota
GTT
Asn
>WENV183008727
OLDN01000155
280532
Bacteroidota
>WENV183008739
OLDN01000245
229246
Bacteroidota
GGC
Ala
>WENV183008723
OLDN01000111
480318
Bacteroidota
CTG
Gln
>WENV183008722
OLDN01000109
158068
Bacteroidota
GGG
Pro
>WENV183008662
OLDN01000002
158068
Bacteroidota
GGG
Pro
>WENV183008821
OLDN01001660
186142
Bacteroidota
GAT
Ile
>WENV183008693
OLDN01000018
398828
Bacteroidota
CCG
Arg
>WENV183008793
OLDN01000916
159415
Bacteroidota
TAC
Val
>WENV183008792
OLDN01000916
159415
Bacteroidota
TAC
Val
>WENV183008762
OLDN01000500
176192
Bacteroidota
TCT
Arg
>WENV183008663
OLDN01000002
280446
Bacteroidota
TTT
Lys
>WENV183008681
OLDN01000011
484496
Bacteroidota
TTG
Gln
>WENV183008772
OLDN01000641
484496
Bacteroidota
TTG
Gln
>WENV183008951
OLDN01015287
285750
Bacteroidota
CCC
Gly
>WENV183008910
OLDN01009881
188555
Bacteroidota
CAT
Met
>WENV183008748
OLDN01000345
117804
Bacteroidota
TAG
Leu
>WENV183008822
OLDN01001660
186143
Bacteroidota
TGC
Ala
>WENV183008786
OLDN01000772
398836
Bacteroidota
GCA
Cys
>WENV183008742
OLDN01000281
398836
Bacteroidota
GCA
Cys
>WENV183008729
OLDN01000174
398836
Bacteroidota
GCA
Cys
>WENV183008720
OLDN01000108
398836
Bacteroidota
GCA
Cys
>WENV183008667
OLDN01000004
398836
Bacteroidota
GCA
Cys
>WENV183008768
OLDN01000586
322836
Bacteroidota
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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