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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
31 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183009036
OLDO01000674
99852
Bacillota
GTA
Tyr
>WENV183009035
OLDO01000674
405363
Bacillota
GCA
Cys
>WENV183009054
OLDO01001293
280428
Bacillota
GAA
Phe
>WENV183009027
OLDO01000541
175842
Bacillota
CAC
Val
>WENV183009012
OLDO01000360
190476
Bacillota
CAT
Met
>WENV183009101
OLDO01006342
398916
Bacillota
>WENV183008999
OLDO01000178
5692
Bacillota
GCT
Ser
>WENV183009121
OLDO01009546
175825
Bacillota
GAT
Ile
>WENV183008978
OLDO01000062
73009
Bacillota
CAG
Leu
>WENV183009142
OLDO01014018
179702
Bacillota
GTC
Asp
>WENV183009058
OLDO01001881
280646
Bacillota
TGC
Ala
>WENV183009068
OLDO01002679
291581
Bacillota
CGG
Pro
>WENV183008982
OLDO01000074
175859
Bacillota
TCT
Arg
>WENV183009120
OLDO01009546
280436
Bacillota
TGC
Ala
>WENV183008990
OLDO01000103
175831
Bacillota
ACG
Arg
>WENV183009067
OLDO01002679
480322
Bacillota
CTG
Gln
>WENV183008994
OLDO01000133
480322
Bacillota
CTG
Gln
>WENV183008970
OLDO01000035
175868
Bacillota
GTT
Asn
>WENV183009066
OLDO01002674
322848
Bacillota
CTT
Lys
>WENV183009033
OLDO01000662
291576
Bacillota
CCC
Gly
>WENV183009024
OLDO01000451
480324
Bacillota
TTG
Gln
>WENV183009043
OLDO01000772
280444
Bacillota
GGT
Thr
>WENV183009018
OLDO01000371
280444
Bacillota
GGT
Thr
>WENV183009051
OLDO01001148
179755
Bacillota
CCG
Arg
>WENV183009110
OLDO01007699
46835
Bacillota
TAA
Leu
>WENV183009013
OLDO01000360
398832
Bacillota
TTC
Glu
>WENV183009109
OLDO01007699
175915
Bacillota
GTC
Asp
>WENV183009000
OLDO01000195
398833
Bacillota
TGT
Thr
>WENV183009017
OLDO01000371
175849
Bacillota
GTC
Asp
>WENV183008998
OLDO01000178
56074
Bacillota
TGA
Ser
>WENV183009031
OLDO01000596
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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