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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
32 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183010242
OLDU01002938
349107
Bacillota
GCC
Gly
>WENV183010252
OLDU01003450
184537
Bacillota
ACG
Arg
>WENV183010257
OLDU01003604
290391
Bacillota
TAC
Val
>WENV183010241
OLDU01002938
280428
Bacillota
GAA
Phe
>WENV183010226
OLDU01001482
408526
Bacillota
GCA
Cys
>WENV183010223
OLDU01001265
296855
Bacillota
GGT
Thr
>WENV183010271
OLDU01005017
48505
Bacillota
TGA
Ser
>WENV183010273
OLDU01005533
289717
Bacillota
CTT
Lys
>WENV183010298
OLDU01009047
20932
Bacillota
GCT
Ser
>WENV183010239
OLDU01002885
291553
Bacillota
GAA
Phe
>WENV183010214
OLDU01000761
339995
Bacillota
TGC
Ala
>WENV183010187
OLDU01000324
20942
Bacillota
GGA
Ser
>WENV183010275
OLDU01005546
280447
Bacillota
GAC
Val
>WENV183010201
OLDU01000494
21311
Bacillota
GCT
Ser
>WENV183010224
OLDU01001265
184495
Bacillota
CAT
Met
>WENV183010311
OLDU01011860
141202
Bacillota
CAA
Leu
>WENV183010220
OLDU01001265
289713
Bacillota
TGT
Thr
>WENV183010249
OLDU01003199
322848
Bacillota
CTT
Lys
>WENV183010232
OLDU01002362
497729
Bacillota
CCA
Trp
>WENV183010256
OLDU01003604
180688
Bacillota
GTC
Asp
>WENV183010279
OLDU01006768
432453
Bacillota
TTC
Glu
>WENV183010234
OLDU01002372
480337
Bacillota
TCC
Gly
>WENV183010244
OLDU01002938
280444
Bacillota
GGT
Thr
>WENV183010260
OLDU01003736
119459
Bacillota
TAG
Leu
>WENV183010238
OLDU01002885
280547
Bacillota
GTC
Asp
>WENV183010225
OLDU01001482
445407
Bacillota
GCC
Gly
>WENV183010280
OLDU01006768
289715
Bacillota
TAC
Val
>WENV183010206
OLDU01000539
280476
Bacillota
TTT
Lys
>WENV183010186
OLDU01000314
20943
Bacillota
CGA
Ser
>WENV183010233
OLDU01002372
208539
Bacillota
TGG
Pro
>WENV183010243
OLDU01002938
175849
Bacillota
GTC
Asp
>WENV183010294
OLDU01007766
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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