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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
46 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183010461
OLDW01000549
100469
Bacillota
GTA
Tyr
>WENV183010351
OLDW01000011
118683
Bacillota
GTA
Tyr
>WENV183010460
OLDW01000549
303627
Bacillota
GAA
Phe
>WENV183010408
OLDW01000194
184537
Bacillota
ACG
Arg
>WENV183010422
OLDW01000251
408526
Bacillota
GCA
Cys
>WENV183010626
OLDW01008965
229015
Bacillota
GTG
His
>WENV183010413
OLDW01000208
296855
Bacillota
GGT
Thr
>WENV183010364
OLDW01000034
48505
Bacillota
TGA
Ser
>WENV183010483
OLDW01000908
348419
Bacillota
GTT
Asn
>WENV183010672
OLDW01019075
184497
Bacillota
GGG
Pro
>WENV183010504
OLDW01001546
289717
Bacillota
CTT
Lys
>WENV183010385
OLDW01000073
289717
Bacillota
CTT
Lys
>WENV183010375
OLDW01000040
400140
Bacillota
TTC
Glu
>WENV183010625
OLDW01008773
179176
Bacillota
ACG
Arg
>WENV183010425
OLDW01000285
20932
Bacillota
GCT
Ser
>WENV183010507
OLDW01001566
482593
Bacillota
CCC
Gly
>WENV183010360
OLDW01000022
339995
Bacillota
TGC
Ala
>WENV183010518
OLDW01001863
20942
Bacillota
GGA
Ser
>WENV183010664
OLDW01016613
73664
Bacillota
CAG
Leu
>WENV183010414
OLDW01000208
184495
Bacillota
CAT
Met
>WENV183010442
OLDW01000422
141202
Bacillota
CAA
Leu
>WENV183010545
OLDW01002912
294020
Bacillota
TAC
Val
>WENV183010346
OLDW01000004
332864
Bacillota
CTT
Lys
>WENV183010634
OLDW01009491
293309
Bacillota
GTT
Asn
>WENV183010410
OLDW01000208
289713
Bacillota
TGT
Thr
>WENV183010538
OLDW01002349
404091
Bacillota
TTG
Gln
>WENV183010537
OLDW01002349
289716
Bacillota
GTG
His
>WENV183010506
OLDW01001554
497729
Bacillota
CCA
Trp
>WENV183010633
OLDW01009475
292374
Bacillota
TGC
Ala
>WENV183010448
OLDW01000458
398857
Bacillota
TTC
Glu
>WENV183010543
OLDW01002860
204381
Bacillota
GAT
Ile
>WENV183010409
OLDW01000194
119459
Bacillota
TAG
Leu
>WENV183010572
OLDW01003487
104114
Bacillota
CAG
Leu
>WENV183010631
OLDW01009440
333281
Bacillota
GTT
Asn
>WENV183010380
OLDW01000070
280547
Bacillota
GTC
Asp
>WENV183010652
OLDW01012987
58120
Bacillota
AAG
Leu
>WENV183010421
OLDW01000251
445407
Bacillota
GCC
Gly
>WENV183010635
OLDW01009491
289761
Bacillota
TTT
Lys
>WENV183010416
OLDW01000210
280476
Bacillota
TTT
Lys
>WENV183010365
OLDW01000036
20943
Bacillota
CGA
Ser
>WENV183010374
OLDW01000040
8724
Bacillota
GCT
Ser
>WENV183010632
OLDW01009475
201856
Bacillota
GAT
Ile
>WENV183010551
OLDW01003130
118370
Bacillota
TAG
Leu
>WENV183010530
OLDW01002117
321248
Bacillota
TAC
Val
>WENV183010440
OLDW01000417
285601
Bacillota
TTC
Glu
>WENV183010651
OLDW01012031
280486
Bacillota
TGC
Ala
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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