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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
26 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183021400
OLFL01001798
285360
Bacteroidota
TTT
Lys
>WENV183021336
OLFL01000016
398829
Bacteroidota
CCT
Arg
>WENV183021468
OLFL01005321
404226
Bacteroidota
CCT
Arg
>WENV183021399
OLFL01001755
175904
Bacteroidota
CGG
Pro
>WENV183021417
OLFL01002279
280553
Bacteroidota
TTT
Lys
>WENV183021358
OLFL01000304
20492
Bacteroidota
GGA
Ser
>WENV183021434
OLFL01003215
398871
Bacteroidota
TTC
Glu
>WENV183021420
OLFL01002546
175906
Bacteroidota
GTG
His
>WENV183021450
OLFL01003732
351598
Bacteroidota
CGG
Pro
>WENV183021375
OLFL01000749
118089
Bacteroidota
TAG
Leu
>WENV183021467
OLFL01005180
280530
Bacteroidota
CCA
Trp
>WENV183021387
OLFL01001321
203954
Bacteroidota
GTC
Asp
>WENV183021433
OLFL01003164
178907
Bacteroidota
TCT
Arg
>WENV183021469
OLFL01005443
20449
Bacteroidota
GGA
Ser
>WENV183021356
OLFL01000222
398860
Bacteroidota
CTC
Glu
>WENV183021346
OLFL01000089
480404
Bacteroidota
TTG
Gln
>WENV183021445
OLFL01003478
99847
Bacteroidota
GTA
Tyr
>WENV183021499
OLFL01010522
399200
Bacteroidota
CAT
Met
>WENV183021347
OLFL01000144
280478
Bacteroidota
GCC
Gly
>WENV183021497
OLFL01009993
175844
Bacteroidota
GGC
Ala
>WENV183021479
OLFL01006126
74084
Bacteroidota
CAG
Leu
>WENV183021382
OLFL01001134
159415
Bacteroidota
TAC
Val
>WENV183021388
OLFL01001420
480325
Bacteroidota
CTG
Gln
>WENV183021337
OLFL01000021
176192
Bacteroidota
TCT
Arg
>WENV183021492
OLFL01008109
285750
Bacteroidota
CCC
Gly
>WENV183021507
OLFL01011524
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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