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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
36 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183022136
OLFO01000098
117741
Bacteroidota
TAG
Leu
>WENV183022156
OLFO01000201
398829
Bacteroidota
CCT
Arg
>WENV183022132
OLFO01000087
73057
Bacteroidota
GAG
Leu
>WENV183022114
OLFO01000047
280557
Bacteroidota
CAT
Met
>WENV183022123
OLFO01000067
280557
Bacteroidota
CAT
Met
>WENV183022141
OLFO01000119
20206
Bacteroidota
GGA
Ser
>WENV183022091
OLFO01000004
201819
Bacteroidota
CAT
Met
>WENV183022105
OLFO01000031
56493
Bacteroidota
TGA
Ser
>WENV183022106
OLFO01000031
175903
Bacteroidota
GTG
His
>WENV183022142
OLFO01000125
351598
Bacteroidota
CGG
Pro
>WENV183022140
OLFO01000114
175936
Bacteroidota
CAT
Met
>WENV183022155
OLFO01000200
57807
Bacteroidota
TGA
Ser
>WENV183022113
OLFO01000044
57807
Bacteroidota
TGA
Ser
>WENV183022175
OLFO01001081
175902
Bacteroidota
GGC
Ala
>WENV183022096
OLFO01000008
398860
Bacteroidota
CTC
Glu
>WENV183022139
OLFO01000108
480404
Bacteroidota
TTG
Gln
>WENV183022100
OLFO01000013
280451
Bacteroidota
CGT
Thr
>WENV183022125
OLFO01000077
488746
Bacteroidota
CTG
Gln
>WENV183022099
OLFO01000012
399026
Bacteroidota
CCT
Arg
>WENV183022085
OLFO01000001
20766
Bacteroidota
GGA
Ser
>WENV183022116
OLFO01000054
280532
Bacteroidota
>WENV183022117
OLFO01000060
229246
Bacteroidota
GGC
Ala
>WENV183022137
OLFO01000104
480318
Bacteroidota
CTG
Gln
>WENV183022098
OLFO01000011
398828
Bacteroidota
CCG
Arg
>WENV183022115
OLFO01000048
176192
Bacteroidota
TCT
Arg
>WENV183022138
OLFO01000105
280446
Bacteroidota
TTT
Lys
>WENV183022119
OLFO01000064
280446
Bacteroidota
TTT
Lys
>WENV183022111
OLFO01000035
484496
Bacteroidota
TTG
Gln
>WENV183022090
OLFO01000003
117804
Bacteroidota
TAG
Leu
>WENV183022108
OLFO01000032
365112
Bacteroidota
TTT
Lys
>WENV183022087
OLFO01000002
365112
Bacteroidota
TTT
Lys
>WENV183022148
OLFO01000185
398836
Bacteroidota
GCA
Cys
>WENV183022126
OLFO01000078
398836
Bacteroidota
GCA
Cys
>WENV183022109
OLFO01000033
170323
Bacteroidota
GGG
Pro
>WENV183022086
OLFO01000002
170323
Bacteroidota
GGG
Pro
>WENV183022094
OLFO01000006
322836
Bacteroidota
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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