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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
55 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183051274
OLGI01034124
99852
Bacillota
GTA
Tyr
>WENV183051070
OLGI01007967
343590
Bacillota
GCC
Gly
>WENV183051147
OLGI01013021
405363
Bacillota
GCA
Cys
>WENV183051158
OLGI01014537
280428
Bacillota
GAA
Phe
>WENV183051003
OLGI01005651
221826
Bacillota
ACG
Arg
>WENV183051258
OLGI01030981
229015
Bacillota
GTG
His
>WENV183050946
OLGI01004629
175842
Bacillota
CAC
Val
>WENV183051293
OLGI01039076
179176
Bacillota
ACG
Arg
>WENV183050543
OLGI01001028
295166
Bacillota
TGC
Ala
>WENV183051042
OLGI01006854
190476
Bacillota
CAT
Met
>WENV183051317
OLGI01049267
482593
Bacillota
CCC
Gly
>WENV183051048
OLGI01007117
280447
Bacillota
GAC
Val
>WENV183050896
OLGI01003869
280447
Bacillota
GAC
Val
>WENV183050650
OLGI01001594
5692
Bacillota
GCT
Ser
>WENV183050787
OLGI01002546
186123
Bacillota
GTC
Asp
>WENV183050547
OLGI01001045
186123
Bacillota
GTC
Asp
>WENV183051180
OLGI01017245
284723
Bacillota
TAC
Val
>WENV183051065
OLGI01007583
73009
Bacillota
CAG
Leu
>WENV183050927
OLGI01004362
481217
Bacillota
GCA
Cys
>WENV183050955
OLGI01004739
291581
Bacillota
CGG
Pro
>WENV183050907
OLGI01004108
175859
Bacillota
TCT
Arg
>WENV183050438
OLGI01000584
398835
Bacillota
GCC
Gly
>WENV183051148
OLGI01013065
175831
Bacillota
ACG
Arg
>WENV183051326
OLGI01053502
187589
Bacillota
CAT
Met
>WENV183050890
OLGI01003788
284627
Bacillota
GAA
Phe
>WENV183050788
OLGI01002546
291634
Bacillota
GAA
Phe
>WENV183050624
OLGI01001434
346451
Bacillota
TTT
Lys
>WENV183051285
OLGI01037293
404091
Bacillota
TTG
Gln
>WENV183051320
OLGI01051697
27216
Bacillota
GCT
Ser
>WENV183050954
OLGI01004739
480322
Bacillota
CTG
Gln
>WENV183051099
OLGI01009881
175868
Bacillota
GTT
Asn
>WENV183051284
OLGI01037293
289716
Bacillota
GTG
His
>WENV183051098
OLGI01009881
398854
Bacillota
CTC
Glu
>WENV183050723
OLGI01002000
291576
Bacillota
CCC
Gly
>WENV183051110
OLGI01010429
480324
Bacillota
TTG
Gln
>WENV183050318
OLGI01000293
303718
Bacillota
TGT
Thr
>WENV183051296
OLGI01039739
186051
Bacillota
GAT
Ile
>WENV183050914
OLGI01004231
398857
Bacillota
TTC
Glu
>WENV183050783
OLGI01002502
204381
Bacillota
GAT
Ile
>WENV183051091
OLGI01009335
280444
Bacillota
GGT
Thr
>WENV183050894
OLGI01003825
179755
Bacillota
CCG
Arg
>WENV183050352
OLGI01000365
46835
Bacillota
TAA
Leu
>WENV183051043
OLGI01006854
398832
Bacillota
TTC
Glu
>WENV183050814
OLGI01002842
25955
Bacillota
GCT
Ser
>WENV183050948
OLGI01004653
280476
Bacillota
TTT
Lys
>WENV183050686
OLGI01001802
289123
Bacillota
GGT
Thr
>WENV183050939
OLGI01004471
184539
Bacillota
TCT
Arg
>WENV183051028
OLGI01006413
285601
Bacillota
TTC
Glu
>WENV183050464
OLGI01000649
175857
Bacillota
GTG
His
>WENV183050891
OLGI01003809
398833
Bacillota
TGT
Thr
>WENV183051090
OLGI01009335
175849
Bacillota
GTC
Asp
>WENV183051314
OLGI01047627
280486
Bacillota
TGC
Ala
>WENV183050628
OLGI01001455
405393
Bacillota
GCC
Gly
>WENV183050649
OLGI01001594
56074
Bacillota
TGA
Ser
>WENV183051176
OLGI01016934
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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