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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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Download
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
15 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183059300
OLHU01000496
402532
Bacteroidota
GCC
Gly
>WENV183059313
OLHU01000592
120026
Bacteroidota
GTA
Tyr
>WENV183059273
OLHU01000203
156605
Bacteroidota
GAC
Val
>WENV183059485
OLHU01008739
402090
Bacteroidota
TTG
Gln
>WENV183059439
OLHU01004712
281190
Bacteroidota
CAT
Met
>WENV183059314
OLHU01000592
365088
Bacteroidota
TCC
Gly
>WENV183059307
OLHU01000536
155786
Bacteroidota
TGG
Pro
>WENV183059515
OLHU01013362
176707
Bacteroidota
TCT
Arg
>WENV183059320
OLHU01000624
366169
Bacteroidota
GAA
Phe
>WENV183059306
OLHU01000536
74253
Bacteroidota
GCT
Ser
>WENV183059535
OLHU01017699
227539
Bacteroidota
GTT
Asn
>WENV183059316
OLHU01000592
372845
Bacteroidota
CCA
Trp
>WENV183059408
OLHU01002476
176817
Bacteroidota
CAT
Met
>WENV183059529
OLHU01016013
361792
Bacteroidota
GAA
Phe
>WENV183059412
OLHU01002549
437306
Bacteroidota
TTC
Glu
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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