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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
86 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183074638
OLIV01000311
117741
Bacteroidota
TAG
Leu
>WENV183074921
OLIV01003265
404226
Bacteroidota
CCT
Arg
>WENV183074452
OLIV01000008
175904
Bacteroidota
CGG
Pro
>WENV183075155
OLIV01014570
400161
Bacteroidota
GGT
Thr
>WENV183074514
OLIV01000063
289031
Bacteroidota
CAT
Met
>WENV183074487
OLIV01000030
280553
Bacteroidota
TTT
Lys
>WENV183074445
OLIV01000006
280553
Bacteroidota
TTT
Lys
>WENV183074430
OLIV01000001
280553
Bacteroidota
TTT
Lys
>WENV183074587
OLIV01000166
280557
Bacteroidota
CAT
Met
>WENV183075002
OLIV01005713
20206
Bacteroidota
GGA
Ser
>WENV183074481
OLIV01000027
483416
Bacteroidota
CTG
Gln
>WENV183074688
OLIV01000472
282712
Bacteroidota
TTT
Lys
>WENV183074563
OLIV01000137
398871
Bacteroidota
TTC
Glu
>WENV183074920
OLIV01003265
398871
Bacteroidota
TTC
Glu
>WENV183074622
OLIV01000251
118221
Bacteroidota
CAA
Leu
>WENV183074676
OLIV01000414
56493
Bacteroidota
TGA
Ser
>WENV183074435
OLIV01000004
56493
Bacteroidota
TGA
Ser
>WENV183074506
OLIV01000053
175906
Bacteroidota
GTG
His
>WENV183074458
OLIV01000011
175906
Bacteroidota
GTG
His
>WENV183074496
OLIV01000041
175903
Bacteroidota
GTG
His
>WENV183074720
OLIV01000623
351598
Bacteroidota
CGG
Pro
>WENV183074704
OLIV01000546
351598
Bacteroidota
CGG
Pro
>WENV183074507
OLIV01000056
351598
Bacteroidota
CGG
Pro
>WENV183074755
OLIV01000935
156068
Bacteroidota
TAC
Val
>WENV183074840
OLIV01001968
118089
Bacteroidota
TAG
Leu
>WENV183074490
OLIV01000037
118089
Bacteroidota
TAG
Leu
>WENV183074453
OLIV01000008
280530
Bacteroidota
CCA
Trp
>WENV183075271
OLIV01031001
157895
Bacteroidota
TAC
Val
>WENV183074472
OLIV01000021
178907
Bacteroidota
TCT
Arg
>WENV183074786
OLIV01001266
56385
Bacteroidota
TGA
Ser
>WENV183074455
OLIV01000008
20449
Bacteroidota
GGA
Ser
>WENV183075156
OLIV01014570
312035
Bacteroidota
CCA
Trp
>WENV183074657
OLIV01000373
56072
Bacteroidota
TAA
Leu
>WENV183074730
OLIV01000673
57807
Bacteroidota
TGA
Ser
>WENV183074516
OLIV01000068
57807
Bacteroidota
TGA
Ser
>WENV183074939
OLIV01003539
175944
Bacteroidota
CAT
Met
>WENV183074548
OLIV01000103
175902
Bacteroidota
GGC
Ala
>WENV183075116
OLIV01010408
280451
Bacteroidota
CGT
Thr
>WENV183074896
OLIV01002800
418894
Bacteroidota
TTC
Glu
>WENV183074711
OLIV01000581
99847
Bacteroidota
GTA
Tyr
>WENV183074575
OLIV01000146
99847
Bacteroidota
GTA
Tyr
>WENV183074461
OLIV01000013
99847
Bacteroidota
GTA
Tyr
>WENV183074850
OLIV01002207
399200
Bacteroidota
CAT
Met
>WENV183074737
OLIV01000738
399200
Bacteroidota
CAT
Met
>WENV183074463
OLIV01000015
399200
Bacteroidota
CAT
Met
>WENV183074754
OLIV01000930
404109
Bacteroidota
CTC
Glu
>WENV183074520
OLIV01000072
186874
Bacteroidota
CAT
Met
>WENV183075102
OLIV01009862
189252
Bacteroidota
GGC
Ala
>WENV183074987
OLIV01005071
46648
Bacteroidota
TAA
Leu
>WENV183074886
OLIV01002591
178179
Bacteroidota
GGC
Ala
>WENV183074519
OLIV01000069
332896
Bacteroidota
TTT
Lys
>WENV183074576
OLIV01000147
488746
Bacteroidota
CTG
Gln
>WENV183074551
OLIV01000107
488746
Bacteroidota
CTG
Gln
>WENV183074902
OLIV01003026
280478
Bacteroidota
GCC
Gly
>WENV183074598
OLIV01000205
280478
Bacteroidota
GCC
Gly
>WENV183074432
OLIV01000003
280478
Bacteroidota
GCC
Gly
>WENV183074843
OLIV01002008
284236
Bacteroidota
CGG
Pro
>WENV183074715
OLIV01000612
20766
Bacteroidota
GGA
Ser
>WENV183074689
OLIV01000474
20766
Bacteroidota
GGA
Ser
>WENV183075304
OLIV01039882
186108
Bacteroidota
GTT
Asn
>WENV183074706
OLIV01000551
175844
Bacteroidota
GGC
Ala
>WENV183074491
OLIV01000037
73011
Bacteroidota
CAA
Leu
>WENV183074882
OLIV01002447
187814
Bacteroidota
GTC
Asp
>WENV183074881
OLIV01002447
187814
Bacteroidota
GTC
Asp
>WENV183075342
OLIV01055279
183889
Bacteroidota
GGC
Ala
>WENV183075316
OLIV01044339
178134
Bacteroidota
TGG
Pro
>WENV183074552
OLIV01000107
158068
Bacteroidota
GGG
Pro
>WENV183075188
OLIV01019598
186142
Bacteroidota
GAT
Ile
>WENV183074599
OLIV01000210
398828
Bacteroidota
CCG
Arg
>WENV183074437
OLIV01000004
398828
Bacteroidota
CCG
Arg
>WENV183074903
OLIV01003026
74084
Bacteroidota
CAG
Leu
>WENV183074449
OLIV01000008
74084
Bacteroidota
CAG
Leu
>WENV183074433
OLIV01000003
74084
Bacteroidota
CAG
Leu
>WENV183074996
OLIV01005473
159415
Bacteroidota
TAC
Val
>WENV183074625
OLIV01000256
480325
Bacteroidota
CTG
Gln
>WENV183074624
OLIV01000256
480325
Bacteroidota
CTG
Gln
>WENV183074749
OLIV01000871
176192
Bacteroidota
TCT
Arg
>WENV183075008
OLIV01005945
176192
Bacteroidota
TCT
Arg
>WENV183074781
OLIV01001180
481328
Bacteroidota
TTG
Gln
>WENV183075076
OLIV01008637
484496
Bacteroidota
TTG
Gln
>WENV183074712
OLIV01000602
484496
Bacteroidota
TTG
Gln
>WENV183074604
OLIV01000220
285750
Bacteroidota
CCC
Gly
>WENV183074471
OLIV01000021
285750
Bacteroidota
CCC
Gly
>WENV183075286
OLIV01036115
186143
Bacteroidota
TGC
Ala
>WENV183074978
OLIV01004764
398836
Bacteroidota
GCA
Cys
>WENV183074579
OLIV01000157
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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