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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
91 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183104004
OLNK01000007
285360
Bacteroidota
TTT
Lys
>WENV183104139
OLNK01000076
285360
Bacteroidota
TTT
Lys
>WENV183104256
OLNK01000174
117741
Bacteroidota
TAG
Leu
>WENV183104065
OLNK01000033
398829
Bacteroidota
CCT
Arg
>WENV183104738
OLNK01001449
175838
Bacteroidota
GTT
Asn
>WENV183104739
OLNK01001449
175838
Bacteroidota
GTT
Asn
>WENV183104026
OLNK01000017
404226
Bacteroidota
CCT
Arg
>WENV183104081
OLNK01000042
175904
Bacteroidota
CGG
Pro
>WENV183104103
OLNK01000057
289031
Bacteroidota
CAT
Met
>WENV183104022
OLNK01000012
280553
Bacteroidota
TTT
Lys
>WENV183104300
OLNK01000199
280553
Bacteroidota
TTT
Lys
>WENV183104485
OLNK01000481
280557
Bacteroidota
CAT
Met
>WENV183104369
OLNK01000271
280557
Bacteroidota
CAT
Met
>WENV183104392
OLNK01000304
20492
Bacteroidota
GGA
Ser
>WENV183104330
OLNK01000227
20206
Bacteroidota
GGA
Ser
>WENV183104142
OLNK01000082
483416
Bacteroidota
CTG
Gln
>WENV183104027
OLNK01000017
398871
Bacteroidota
TTC
Glu
>WENV183104028
OLNK01000017
398871
Bacteroidota
TTC
Glu
>WENV183104070
OLNK01000036
201819
Bacteroidota
CAT
Met
>WENV183104085
OLNK01000043
56493
Bacteroidota
TGA
Ser
>WENV183104309
OLNK01000210
175906
Bacteroidota
GTG
His
>WENV183104308
OLNK01000210
175906
Bacteroidota
GTG
His
>WENV183104086
OLNK01000043
175903
Bacteroidota
GTG
His
>WENV183104641
OLNK01000929
351598
Bacteroidota
CGG
Pro
>WENV183104596
OLNK01000775
351598
Bacteroidota
CGG
Pro
>WENV183104105
OLNK01000058
351598
Bacteroidota
CGG
Pro
>WENV183104153
OLNK01000092
118089
Bacteroidota
TAG
Leu
>WENV183104368
OLNK01000270
169545
Bacteroidota
TGG
Pro
>WENV183104082
OLNK01000042
280530
Bacteroidota
CCA
Trp
>WENV183104306
OLNK01000207
175936
Bacteroidota
CAT
Met
>WENV183104030
OLNK01000018
203954
Bacteroidota
GTC
Asp
>WENV183104029
OLNK01000018
203954
Bacteroidota
GTC
Asp
>WENV183104075
OLNK01000039
178907
Bacteroidota
TCT
Arg
>WENV183104613
OLNK01000821
20449
Bacteroidota
GGA
Ser
>WENV183104242
OLNK01000159
20449
Bacteroidota
GGA
Ser
>WENV183104067
OLNK01000033
56072
Bacteroidota
TAA
Leu
>WENV183104410
OLNK01000349
398860
Bacteroidota
CTC
Glu
>WENV183104359
OLNK01000260
398860
Bacteroidota
CTC
Glu
>WENV183104622
OLNK01000852
480404
Bacteroidota
TTG
Gln
>WENV183104583
OLNK01000700
480404
Bacteroidota
TTG
Gln
>WENV183104391
OLNK01000303
280451
Bacteroidota
CGT
Thr
>WENV183104118
OLNK01000061
99847
Bacteroidota
GTA
Tyr
>WENV183104370
OLNK01000275
99847
Bacteroidota
GTA
Tyr
>WENV183104249
OLNK01000167
399200
Bacteroidota
CAT
Met
>WENV183104063
OLNK01000030
399200
Bacteroidota
CAT
Met
>WENV183104158
OLNK01000098
186874
Bacteroidota
CAT
Met
>WENV183104405
OLNK01000344
178179
Bacteroidota
GGC
Ala
>WENV183104329
OLNK01000227
488746
Bacteroidota
CTG
Gln
>WENV183104278
OLNK01000183
399026
Bacteroidota
CCT
Arg
>WENV183104209
OLNK01000128
280478
Bacteroidota
GCC
Gly
>WENV183104207
OLNK01000128
280478
Bacteroidota
GCC
Gly
>WENV183104017
OLNK01000012
280478
Bacteroidota
GCC
Gly
>WENV183104034
OLNK01000020
27524
Bacteroidota
GGA
Ser
>WENV183103995
OLNK01000003
27524
Bacteroidota
GGA
Ser
>WENV183104446
OLNK01000434
280532
Bacteroidota
>WENV183104009
OLNK01000009
229246
Bacteroidota
GGC
Ala
>WENV183104152
OLNK01000092
73011
Bacteroidota
CAA
Leu
>WENV183104245
OLNK01000161
480318
Bacteroidota
CTG
Gln
>WENV183104072
OLNK01000036
398828
Bacteroidota
CCG
Arg
>WENV183104078
OLNK01000042
74084
Bacteroidota
CAG
Leu
>WENV183104018
OLNK01000012
74084
Bacteroidota
CAG
Leu
>WENV183104427
OLNK01000381
159415
Bacteroidota
TAC
Val
>WENV183104426
OLNK01000381
159415
Bacteroidota
TAC
Val
>WENV183104032
OLNK01000018
480325
Bacteroidota
CTG
Gln
>WENV183104031
OLNK01000018
480325
Bacteroidota
CTG
Gln
>WENV183104790
OLNK01001713
140771
Bacteroidota
>WENV183104232
OLNK01000150
176192
Bacteroidota
TCT
Arg
>WENV183104007
OLNK01000008
176192
Bacteroidota
TCT
Arg
>WENV183104013
OLNK01000010
400088
Bacteroidota
GGT
Thr
>WENV183104428
OLNK01000384
69204
Bacteroidota
TGA
Ser
>WENV183104419
OLNK01000366
69204
Bacteroidota
TGA
Ser
>WENV183104238
OLNK01000156
69204
Bacteroidota
TGA
Ser
>WENV183104182
OLNK01000110
69204
Bacteroidota
TGA
Ser
>WENV183104201
OLNK01000124
280446
Bacteroidota
TTT
Lys
>WENV183104257
OLNK01000175
484496
Bacteroidota
TTG
Gln
>WENV183104184
OLNK01000114
484496
Bacteroidota
TTG
Gln
>WENV183104463
OLNK01000456
27502
Bacteroidota
GGA
Ser
>WENV183104076
OLNK01000039
285750
Bacteroidota
CCC
Gly
>WENV183104106
OLNK01000058
117804
Bacteroidota
TAG
Leu
>WENV183104357
OLNK01000260
365112
Bacteroidota
TTT
Lys
>WENV183104141
OLNK01000078
365112
Bacteroidota
TTT
Lys
>WENV183104120
OLNK01000061
365112
Bacteroidota
TTT
Lys
>WENV183104040
OLNK01000023
365112
Bacteroidota
TTT
Lys
>WENV183104000
OLNK01000006
365112
Bacteroidota
TTT
Lys
>WENV183104512
OLNK01000528
398836
Bacteroidota
GCA
Cys
>WENV183104333
OLNK01000232
398836
Bacteroidota
GCA
Cys
>WENV183104239
OLNK01000156
398836
Bacteroidota
GCA
Cys
>WENV183104217
OLNK01000132
398836
Bacteroidota
GCA
Cys
>WENV183104092
OLNK01000051
398836
Bacteroidota
GCA
Cys
>WENV183104077
OLNK01000040
170323
Bacteroidota
GGG
Pro
>WENV183104490
OLNK01000497
322836
Bacteroidota
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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