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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
40 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183107808
OLNM01014817
176499
Actinomycetota
CAT
Met
>WENV183107930
OLNM01028118
175883
Actinomycetota
GAT
Ile
>WENV183107823
OLNM01015590
175907
Actinomycetota
TAC
Val
>WENV183108029
OLNM01043103
280498
Actinomycetota
GTT
Asn
>WENV183107015
OLNM01000418
280503
Actinomycetota
CCT
Arg
>WENV183107597
OLNM01007137
140768
Actinomycetota
TAG
Leu
>WENV183107866
OLNM01019913
176075
Actinomycetota
TCT
Arg
>WENV183108115
OLNM01058911
176078
Actinomycetota
GGG
Pro
>WENV183107620
OLNM01007687
59689
Actinomycetota
GGA
Ser
>WENV183108047
OLNM01045769
175837
Actinomycetota
ACG
Arg
>WENV183108153
OLNM01068829
280549
Actinomycetota
CAC
Val
>WENV183107838
OLNM01017187
184493
Actinomycetota
GGG
Pro
>WENV183107192
OLNM01001264
398843
Actinomycetota
GTT
Asn
>WENV183108068
OLNM01049353
281635
Actinomycetota
GGC
Ala
>WENV183107567
OLNM01006586
280524
Actinomycetota
TGC
Ala
>WENV183107463
OLNM01004225
176723
Actinomycetota
TCT
Arg
>WENV183107261
OLNM01001734
291585
Actinomycetota
GCC
Gly
>WENV183107262
OLNM01001734
291585
Actinomycetota
GCC
Gly
>WENV183108181
OLNM01085867
150272
Actinomycetota
TAA
Leu
>WENV183107568
OLNM01006586
280523
Actinomycetota
GGC
Ala
>WENV183107799
OLNM01014470
176555
Actinomycetota
CAT
Met
>WENV183107600
OLNM01007297
191955
Actinomycetota
TGT
Thr
>WENV183107101
OLNM01000696
280536
Actinomycetota
CTT
Lys
>WENV183107861
OLNM01019386
280496
Actinomycetota
CGT
Thr
>WENV183107809
OLNM01014836
280703
Actinomycetota
CCT
Arg
>WENV183106804
OLNM01000030
175926
Actinomycetota
CAT
Met
>WENV183107447
OLNM01003999
280450
Actinomycetota
TTT
Lys
>WENV183107491
OLNM01004773
480329
Actinomycetota
CCC
Gly
>WENV183107057
OLNM01000564
483206
Actinomycetota
CTG
Gln
>WENV183107502
OLNM01005096
175882
Actinomycetota
TGG
Pro
>WENV183107827
OLNM01016082
20209
Actinomycetota
GAG
Leu
>WENV183107858
OLNM01018740
480319
Actinomycetota
TTG
Gln
>WENV183107440
OLNM01003992
280489
Actinomycetota
CTC
Glu
>WENV183107822
OLNM01015585
280499
Actinomycetota
CCT
Arg
>WENV183107441
OLNM01003992
398853
Actinomycetota
CTG
Gln
>WENV183108063
OLNM01047828
175843
Actinomycetota
CAA
Leu
>WENV183107538
OLNM01005932
104211
Actinomycetota
CAG
Leu
>WENV183107712
OLNM01011039
317680
Actinomycetota
CCG
Arg
>WENV183107807
OLNM01014817
117903
Actinomycetota
GTA
Tyr
>WENV183107596
OLNM01007137
280470
Actinomycetota
CGT
Thr
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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