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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
84 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183119773
OLNU01000049
179231
Actinomycetota
TAC
Val
>WENV183119704
OLNU01000013
176499
Actinomycetota
CAT
Met
>WENV183120995
OLNU01026538
175883
Actinomycetota
GAT
Ile
>WENV183120997
OLNU01026538
175883
Actinomycetota
GAT
Ile
>WENV183119708
OLNU01000016
175907
Actinomycetota
TAC
Val
>WENV183120791
OLNU01007475
14009
Actinomycetota
GGA
Ser
>WENV183119646
OLNU01000001
280498
Actinomycetota
GTT
Asn
>WENV183119642
OLNU01000001
280498
Actinomycetota
GTT
Asn
>WENV183120510
OLNU01002388
280503
Actinomycetota
CCT
Arg
>WENV183119761
OLNU01000041
295964
Actinomycetota
GTT
Asn
>WENV183119949
OLNU01000199
295964
Actinomycetota
GTT
Asn
>WENV183119665
OLNU01000003
56083
Actinomycetota
CGA
Ser
>WENV183119781
OLNU01000054
140768
Actinomycetota
TAG
Leu
>WENV183119659
OLNU01000002
140768
Actinomycetota
TAG
Leu
>WENV183119994
OLNU01000247
176075
Actinomycetota
TCT
Arg
>WENV183119689
OLNU01000008
176078
Actinomycetota
GGG
Pro
>WENV183119690
OLNU01000008
20208
Actinomycetota
GAG
Leu
>WENV183119723
OLNU01000020
59689
Actinomycetota
GGA
Ser
>WENV183120115
OLNU01000447
175837
Actinomycetota
ACG
Arg
>WENV183120114
OLNU01000447
175837
Actinomycetota
ACG
Arg
>WENV183120253
OLNU01000802
180826
Actinomycetota
GGG
Pro
>WENV183120454
OLNU01001925
180826
Actinomycetota
GGG
Pro
>WENV183119664
OLNU01000003
29393
Actinomycetota
GCT
Ser
>WENV183119779
OLNU01000054
280549
Actinomycetota
CAC
Val
>WENV183119719
OLNU01000020
349164
Actinomycetota
CTC
Glu
>WENV183119936
OLNU01000185
280441
Actinomycetota
CCG
Arg
>WENV183120278
OLNU01000890
280702
Actinomycetota
GGC
Ala
>WENV183120277
OLNU01000890
280702
Actinomycetota
GGC
Ala
>WENV183120910
OLNU01014473
398843
Actinomycetota
GTT
Asn
>WENV183120909
OLNU01014473
398843
Actinomycetota
GTT
Asn
>WENV183119778
OLNU01000054
434162
Actinomycetota
GAC
Val
>WENV183119669
OLNU01000003
176077
Actinomycetota
CAT
Met
>WENV183120240
OLNU01000736
241064
Actinomycetota
CTC
Glu
>WENV183120239
OLNU01000736
241064
Actinomycetota
CTC
Glu
>WENV183119651
OLNU01000001
176638
Actinomycetota
GGG
Pro
>WENV183119840
OLNU01000084
280524
Actinomycetota
TGC
Ala
>WENV183119941
OLNU01000195
280524
Actinomycetota
TGC
Ala
>WENV183120600
OLNU01003182
481719
Actinomycetota
GCA
Cys
>WENV183119660
OLNU01000003
398948
Actinomycetota
TTC
Glu
>WENV183120602
OLNU01003182
291585
Actinomycetota
GCC
Gly
>WENV183120601
OLNU01003182
291585
Actinomycetota
GCC
Gly
>WENV183120599
OLNU01003182
291585
Actinomycetota
GCC
Gly
>WENV183119774
OLNU01000050
150272
Actinomycetota
TAA
Leu
>WENV183119662
OLNU01000003
117777
Actinomycetota
>WENV183119942
OLNU01000195
280523
Actinomycetota
GGC
Ala
>WENV183119645
OLNU01000001
280523
Actinomycetota
GGC
Ala
>WENV183119663
OLNU01000003
175949
Actinomycetota
CAT
Met
>WENV183119841
OLNU01000084
191955
Actinomycetota
TGT
Thr
>WENV183119742
OLNU01000032
175841
Actinomycetota
TAT
Ile
>WENV183119993
OLNU01000247
280544
Actinomycetota
GTG
His
>WENV183120862
OLNU01010846
280536
Actinomycetota
CTT
Lys
>WENV183120861
OLNU01010846
280536
Actinomycetota
CTT
Lys
>WENV183119782
OLNU01000054
280496
Actinomycetota
CGT
Thr
>WENV183119698
OLNU01000013
175872
Actinomycetota
GTC
Asp
>WENV183119707
OLNU01000013
175872
Actinomycetota
GTC
Asp
>WENV183119670
OLNU01000003
280703
Actinomycetota
CCT
Arg
>WENV183119701
OLNU01000013
20205
Actinomycetota
GCT
Ser
>WENV183120318
OLNU01001006
184157
Actinomycetota
TGG
Pro
>WENV183119816
OLNU01000070
175926
Actinomycetota
CAT
Met
>WENV183119653
OLNU01000002
280450
Actinomycetota
TTT
Lys
>WENV183119780
OLNU01000054
323758
Actinomycetota
CGT
Thr
>WENV183119776
OLNU01000054
358727
Actinomycetota
CCG
Arg
>WENV183119655
OLNU01000002
480329
Actinomycetota
CCC
Gly
>WENV183120055
OLNU01000320
175882
Actinomycetota
TGG
Pro
>WENV183119652
OLNU01000001
20209
Actinomycetota
GAG
Leu
>WENV183119866
OLNU01000107
99865
Actinomycetota
CAG
Leu
>WENV183119722
OLNU01000020
222475
Actinomycetota
CTT
Lys
>WENV183119644
OLNU01000001
480319
Actinomycetota
TTG
Gln
>WENV183120100
OLNU01000423
280499
Actinomycetota
CCT
Arg
>WENV183119720
OLNU01000020
398853
Actinomycetota
CTG
Gln
>WENV183119657
OLNU01000002
398853
Actinomycetota
CTG
Gln
>WENV183120559
OLNU01002821
175843
Actinomycetota
CAA
Leu
>WENV183120054
OLNU01000320
175843
Actinomycetota
CAA
Leu
>WENV183119743
OLNU01000032
203883
Actinomycetota
TCT
Arg
>WENV183119666
OLNU01000003
56075
Actinomycetota
TGA
Ser
>WENV183119700
OLNU01000013
46642
Actinomycetota
CGA
Ser
>WENV183119654
OLNU01000002
104211
Actinomycetota
CAG
Leu
>WENV183119703
OLNU01000013
117903
Actinomycetota
GTA
Tyr
>WENV183119705
OLNU01000013
56071
Actinomycetota
TGA
Ser
>WENV183119839
OLNU01000084
179238
Actinomycetota
GAT
Ile
>WENV183119867
OLNU01000108
147796
Actinomycetota
TAA
Leu
>WENV183120276
OLNU01000890
506175
Actinomycetota
TTG
Gln
>WENV183119658
OLNU01000002
280470
Actinomycetota
CGT
Thr
>WENV183119865
OLNU01000107
480376
Actinomycetota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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