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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
115 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183133759
OLOC01000649
179231
Actinomycetota
TAC
Val
>WENV183133552
OLOC01000178
176499
Actinomycetota
CAT
Met
>WENV183134012
OLOC01002597
176499
Actinomycetota
CAT
Met
>WENV183133461
OLOC01000064
175883
Actinomycetota
GAT
Ile
>WENV183133463
OLOC01000064
175883
Actinomycetota
GAT
Ile
>WENV183133444
OLOC01000052
175907
Actinomycetota
TAC
Val
>WENV183134093
OLOC01004265
14009
Actinomycetota
GGA
Ser
>WENV183133438
OLOC01000045
283311
Actinomycetota
CCT
Arg
>WENV183134006
OLOC01002535
280498
Actinomycetota
GTT
Asn
>WENV183133549
OLOC01000172
280498
Actinomycetota
GTT
Asn
>WENV183133353
OLOC01000011
280498
Actinomycetota
GTT
Asn
>WENV183133793
OLOC01000769
316729
Actinomycetota
CAC
Val
>WENV183133704
OLOC01000460
316729
Actinomycetota
CAC
Val
>WENV183133530
OLOC01000138
280503
Actinomycetota
CCT
Arg
>WENV183134007
OLOC01002535
295964
Actinomycetota
GTT
Asn
>WENV183133758
OLOC01000642
295964
Actinomycetota
GTT
Asn
>WENV183133865
OLOC01001217
56083
Actinomycetota
CGA
Ser
>WENV183133886
OLOC01001343
140768
Actinomycetota
TAG
Leu
>WENV183133342
OLOC01000005
140768
Actinomycetota
TAG
Leu
>WENV183133791
OLOC01000765
56384
Actinomycetota
TGA
Ser
>WENV183133440
OLOC01000046
176075
Actinomycetota
TCT
Arg
>WENV183133689
OLOC01000433
176075
Actinomycetota
TCT
Arg
>WENV183133418
OLOC01000032
175848
Actinomycetota
TGG
Pro
>WENV183133750
OLOC01000607
176078
Actinomycetota
GGG
Pro
>WENV183133448
OLOC01000060
176078
Actinomycetota
GGG
Pro
>WENV183133498
OLOC01000100
20208
Actinomycetota
GAG
Leu
>WENV183133453
OLOC01000063
152047
Actinomycetota
ACG
Arg
>WENV183133708
OLOC01000465
59689
Actinomycetota
GGA
Ser
>WENV183133345
OLOC01000005
59689
Actinomycetota
GGA
Ser
>WENV183133735
OLOC01000561
175837
Actinomycetota
ACG
Arg
>WENV183133734
OLOC01000561
175837
Actinomycetota
ACG
Arg
>WENV183133521
OLOC01000122
175837
Actinomycetota
ACG
Arg
>WENV183133875
OLOC01001275
180826
Actinomycetota
GGG
Pro
>WENV183133480
OLOC01000077
29393
Actinomycetota
GCT
Ser
>WENV183133340
OLOC01000005
280549
Actinomycetota
CAC
Val
>WENV183133792
OLOC01000767
24925
Actinomycetota
GCT
Ser
>WENV183133755
OLOC01000615
56383
Actinomycetota
CGA
Ser
>WENV183133838
OLOC01001070
280441
Actinomycetota
CCG
Arg
>WENV183133417
OLOC01000032
280702
Actinomycetota
GGC
Ala
>WENV183133416
OLOC01000032
280702
Actinomycetota
GGC
Ala
>WENV183133524
OLOC01000133
140878
Actinomycetota
TAA
Leu
>WENV183133431
OLOC01000039
398843
Actinomycetota
GTT
Asn
>WENV183133430
OLOC01000039
398843
Actinomycetota
GTT
Asn
>WENV183133339
OLOC01000005
434162
Actinomycetota
GAC
Val
>WENV183133329
OLOC01000003
176077
Actinomycetota
CAT
Met
>WENV183133434
OLOC01000039
298224
Actinomycetota
GGC
Ala
>WENV183133443
OLOC01000052
283312
Actinomycetota
GTG
His
>WENV183133654
OLOC01000342
241064
Actinomycetota
CTC
Glu
>WENV183133433
OLOC01000039
241064
Actinomycetota
CTC
Glu
>WENV183133432
OLOC01000039
241064
Actinomycetota
CTC
Glu
>WENV183133359
OLOC01000011
176638
Actinomycetota
GGG
Pro
>WENV183134026
OLOC01002886
280524
Actinomycetota
TGC
Ala
>WENV183133599
OLOC01000230
280524
Actinomycetota
TGC
Ala
>WENV183133365
OLOC01000014
481719
Actinomycetota
GCA
Cys
>WENV183133649
OLOC01000338
283313
Actinomycetota
CCG
Arg
>WENV183133815
OLOC01000852
398948
Actinomycetota
TTC
Glu
>WENV183133331
OLOC01000003
398948
Actinomycetota
TTC
Glu
>WENV183133367
OLOC01000014
291585
Actinomycetota
GCC
Gly
>WENV183133366
OLOC01000014
291585
Actinomycetota
GCC
Gly
>WENV183133364
OLOC01000014
291585
Actinomycetota
GCC
Gly
>WENV183133419
OLOC01000032
150272
Actinomycetota
TAA
Leu
>WENV183134011
OLOC01002597
117777
Actinomycetota
>WENV183133478
OLOC01000077
117777
Actinomycetota
>WENV183134027
OLOC01002886
280523
Actinomycetota
GGC
Ala
>WENV183133705
OLOC01000460
280523
Actinomycetota
GGC
Ala
>WENV183133677
OLOC01000399
280523
Actinomycetota
GGC
Ala
>WENV183133548
OLOC01000172
280523
Actinomycetota
GGC
Ala
>WENV183133479
OLOC01000077
175949
Actinomycetota
CAT
Met
>WENV183133578
OLOC01000217
227544
Actinomycetota
TAC
Val
>WENV183133442
OLOC01000050
191955
Actinomycetota
TGT
Thr
>WENV183133662
OLOC01000366
175841
Actinomycetota
TAT
Ile
>WENV183133710
OLOC01000471
20415
Actinomycetota
GAG
Leu
>WENV183133439
OLOC01000046
280544
Actinomycetota
GTG
His
>WENV183133381
OLOC01000020
280536
Actinomycetota
CTT
Lys
>WENV183133380
OLOC01000020
280536
Actinomycetota
CTT
Lys
>WENV183133343
OLOC01000005
280496
Actinomycetota
CGT
Thr
>WENV183133866
OLOC01001223
175872
Actinomycetota
GTC
Asp
>WENV183133330
OLOC01000003
280703
Actinomycetota
CCT
Arg
>WENV183134010
OLOC01002580
140879
Actinomycetota
TAG
Leu
>WENV183133843
OLOC01001107
20205
Actinomycetota
GCT
Ser
>WENV183133951
OLOC01001916
175926
Actinomycetota
CAT
Met
>WENV183133926
OLOC01001588
178569
Actinomycetota
CAT
Met
>WENV183134171
OLOC01007709
280450
Actinomycetota
TTT
Lys
>WENV183133341
OLOC01000005
323758
Actinomycetota
CGT
Thr
>WENV183133337
OLOC01000005
358727
Actinomycetota
CCG
Arg
>WENV183133914
OLOC01001478
480329
Actinomycetota
CCC
Gly
>WENV183133493
OLOC01000092
480329
Actinomycetota
CCC
Gly
>WENV183133653
OLOC01000342
483206
Actinomycetota
CTG
Gln
>WENV183133613
OLOC01000254
175882
Actinomycetota
TGG
Pro
>WENV183133360
OLOC01000011
20209
Actinomycetota
GAG
Leu
>WENV183133718
OLOC01000486
99865
Actinomycetota
CAG
Leu
>WENV183133494
OLOC01000092
99865
Actinomycetota
CAG
Leu
>WENV183133826
OLOC01000915
222475
Actinomycetota
CTT
Lys
>WENV183133336
OLOC01000005
222475
Actinomycetota
CTT
Lys
>WENV183134055
OLOC01003273
480319
Actinomycetota
TTG
Gln
>WENV183133827
OLOC01000921
280489
Actinomycetota
CTC
Glu
>WENV183133814
OLOC01000849
280499
Actinomycetota
CCT
Arg
>WENV183133828
OLOC01000921
398853
Actinomycetota
CTG
Gln
>WENV183133648
OLOC01000338
398853
Actinomycetota
CTG
Gln
>WENV183133334
OLOC01000005
398853
Actinomycetota
CTG
Gln
>WENV183133612
OLOC01000254
175843
Actinomycetota
CAA
Leu
>WENV183133525
OLOC01000133
175843
Actinomycetota
CAA
Leu
>WENV183133420
OLOC01000032
175843
Actinomycetota
CAA
Leu
>WENV183133537
OLOC01000154
203883
Actinomycetota
TCT
Arg
>WENV183133326
OLOC01000003
56075
Actinomycetota
TGA
Ser
>WENV183134052
OLOC01003174
46642
Actinomycetota
CGA
Ser
>WENV183133522
OLOC01000122
178568
Actinomycetota
ACG
Arg
>WENV183133551
OLOC01000178
117903
Actinomycetota
GTA
Tyr
>WENV183133694
OLOC01000444
56071
Actinomycetota
TGA
Ser
>WENV183133535
OLOC01000148
147796
Actinomycetota
TAA
Leu
>WENV183133678
OLOC01000399
506175
Actinomycetota
TTG
Gln
>WENV183133415
OLOC01000032
506175
Actinomycetota
TTG
Gln
>WENV183133885
OLOC01001343
280470
Actinomycetota
CGT
Thr
>WENV183134009
OLOC01002580
280470
Actinomycetota
CGT
Thr
>WENV183133876
OLOC01001297
480376
Actinomycetota
CCC
Gly
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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