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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
|
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
70 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183133634
OLOC01000298
99852
Bacillota
GTA
Tyr
>WENV183133813
OLOC01000846
416763
Bacillota
CTC
Glu
>WENV183133752
OLOC01000608
349107
Bacillota
GCC
Gly
>WENV183133955
OLOC01001954
349107
Bacillota
GCC
Gly
>WENV183133747
OLOC01000604
405363
Bacillota
GCA
Cys
>WENV183133483
OLOC01000079
290391
Bacillota
TAC
Val
>WENV183133954
OLOC01001954
280428
Bacillota
GAA
Phe
>WENV183133751
OLOC01000608
280428
Bacillota
GAA
Phe
>WENV183134043
OLOC01003039
179917
Bacillota
CAT
Met
>WENV183133507
OLOC01000109
175842
Bacillota
CAC
Val
>WENV183133411
OLOC01000028
228119
Bacillota
TCT
Arg
>WENV183133405
OLOC01000028
228119
Bacillota
TCT
Arg
>WENV183133839
OLOC01001084
348419
Bacillota
GTT
Asn
>WENV183134126
OLOC01005141
184497
Bacillota
GGG
Pro
>WENV183133948
OLOC01001879
184497
Bacillota
GGG
Pro
>WENV183133927
OLOC01001605
184497
Bacillota
GGG
Pro
>WENV183133622
OLOC01000275
184497
Bacillota
GGG
Pro
>WENV183133809
OLOC01000829
179176
Bacillota
ACG
Arg
>WENV183133426
OLOC01000036
179176
Bacillota
ACG
Arg
>WENV183133853
OLOC01001146
352588
Bacillota
CAT
Met
>WENV183133605
OLOC01000240
190476
Bacillota
CAT
Met
>WENV183133778
OLOC01000717
280447
Bacillota
GAC
Val
>WENV183133491
OLOC01000086
5692
Bacillota
GCT
Ser
>WENV183133427
OLOC01000036
284723
Bacillota
TAC
Val
>WENV183133989
OLOC01002502
73009
Bacillota
CAG
Leu
>WENV183133630
OLOC01000288
73009
Bacillota
CAG
Leu
>WENV183134101
OLOC01004472
481217
Bacillota
GCA
Cys
>WENV183133915
OLOC01001493
481217
Bacillota
GCA
Cys
>WENV183133903
OLOC01001416
481217
Bacillota
GCA
Cys
>WENV183134182
OLOC01010494
407726
Bacillota
CTG
Gln
>WENV183133864
OLOC01001211
407726
Bacillota
CTG
Gln
>WENV183133629
OLOC01000287
291581
Bacillota
CGG
Pro
>WENV183133987
OLOC01002502
175859
Bacillota
TCT
Arg
>WENV183133823
OLOC01000878
21311
Bacillota
GCT
Ser
>WENV183133777
OLOC01000715
175831
Bacillota
ACG
Arg
>WENV183133891
OLOC01001381
480322
Bacillota
CTG
Gln
>WENV183133628
OLOC01000287
480322
Bacillota
CTG
Gln
>WENV183134076
OLOC01003725
401685
Bacillota
TTG
Gln
>WENV183133485
OLOC01000080
175868
Bacillota
GTT
Asn
>WENV183134087
OLOC01004176
322848
Bacillota
CTT
Lys
>WENV183134086
OLOC01004176
398854
Bacillota
CTC
Glu
>WENV183133869
OLOC01001241
291576
Bacillota
CCC
Gly
>WENV183133504
OLOC01000106
480324
Bacillota
TTG
Gln
>WENV183133681
OLOC01000408
400963
Bacillota
GTT
Asn
>WENV183133985
OLOC01002412
73638
Bacillota
AAG
Leu
>WENV183133968
OLOC01002143
398857
Bacillota
TTC
Glu
>WENV183133659
OLOC01000359
280444
Bacillota
GGT
Thr
>WENV183133661
OLOC01000359
280444
Bacillota
GGT
Thr
>WENV183134118
OLOC01004952
179755
Bacillota
CCG
Arg
>WENV183133798
OLOC01000791
179755
Bacillota
CCG
Arg
>WENV183133604
OLOC01000240
179755
Bacillota
CCG
Arg
>WENV183134159
OLOC01006684
58120
Bacillota
AAG
Leu
>WENV183134158
OLOC01006684
58120
Bacillota
AAG
Leu
>WENV183133972
OLOC01002204
58120
Bacillota
AAG
Leu
>WENV183133906
OLOC01001431
58120
Bacillota
AAG
Leu
>WENV183133606
OLOC01000240
398832
Bacillota
TTC
Glu
>WENV183133475
OLOC01000076
25955
Bacillota
GCT
Ser
>WENV183134056
OLOC01003280
52748
Bacillota
TGA
Ser
>WENV183133407
OLOC01000028
280476
Bacillota
TTT
Lys
>WENV183133413
OLOC01000028
280476
Bacillota
TTT
Lys
>WENV183133557
OLOC01000191
280476
Bacillota
TTT
Lys
>WENV183133711
OLOC01000478
332651
Bacillota
GTT
Asn
>WENV183133978
OLOC01002291
280483
Bacillota
GAA
Phe
>WENV183133945
OLOC01001864
298260
Bacillota
GTT
Asn
>WENV183134075
OLOC01003725
175857
Bacillota
GTG
His
>WENV183133633
OLOC01000298
398833
Bacillota
TGT
Thr
>WENV183133658
OLOC01000359
175849
Bacillota
GTC
Asp
>WENV183134215
OLOC01021064
178610
Bacillota
GTT
Asn
>WENV183133490
OLOC01000086
56074
Bacillota
TGA
Ser
>WENV183133627
OLOC01000287
280473
Bacillota
TGG
Pro
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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