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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
36 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183141135
OLOJ01001164
117741
Bacteroidota
TAG
Leu
>WENV183141334
OLOJ01002350
398829
Bacteroidota
CCT
Arg
>WENV183140797
OLOJ01000231
175838
Bacteroidota
GTT
Asn
>WENV183142000
OLOJ01049978
404226
Bacteroidota
CCT
Arg
>WENV183140696
OLOJ01000090
289031
Bacteroidota
CAT
Met
>WENV183140822
OLOJ01000276
289031
Bacteroidota
CAT
Met
>WENV183140805
OLOJ01000245
280557
Bacteroidota
CAT
Met
>WENV183141544
OLOJ01004832
20492
Bacteroidota
GGA
Ser
>WENV183140722
OLOJ01000117
20206
Bacteroidota
GGA
Ser
>WENV183140642
OLOJ01000050
483416
Bacteroidota
CTG
Gln
>WENV183140625
OLOJ01000042
483416
Bacteroidota
CTG
Gln
>WENV183140670
OLOJ01000076
175903
Bacteroidota
GTG
His
>WENV183141349
OLOJ01002459
351598
Bacteroidota
CGG
Pro
>WENV183141606
OLOJ01006179
351598
Bacteroidota
CGG
Pro
>WENV183140907
OLOJ01000419
405877
Bacteroidota
GGT
Thr
>WENV183141384
OLOJ01002717
29791
Bacteroidota
GCT
Ser
>WENV183140624
OLOJ01000041
21127
Bacteroidota
GGA
Ser
>WENV183141356
OLOJ01002548
56072
Bacteroidota
TAA
Leu
>WENV183141734
OLOJ01010733
57807
Bacteroidota
TGA
Ser
>WENV183141147
OLOJ01001211
57807
Bacteroidota
TGA
Ser
>WENV183141405
OLOJ01002884
175902
Bacteroidota
GGC
Ala
>WENV183141385
OLOJ01002717
398860
Bacteroidota
CTC
Glu
>WENV183142045
OLOJ01063514
280451
Bacteroidota
CGT
Thr
>WENV183141496
OLOJ01003989
99847
Bacteroidota
GTA
Tyr
>WENV183140786
OLOJ01000211
99847
Bacteroidota
GTA
Tyr
>WENV183141201
OLOJ01001582
186874
Bacteroidota
CAT
Met
>WENV183141904
OLOJ01026691
332896
Bacteroidota
TTT
Lys
>WENV183140828
OLOJ01000288
488746
Bacteroidota
CTG
Gln
>WENV183140827
OLOJ01000288
158068
Bacteroidota
GGG
Pro
>WENV183141231
OLOJ01001792
158068
Bacteroidota
GGG
Pro
>WENV183141154
OLOJ01001238
398828
Bacteroidota
CCG
Arg
>WENV183141161
OLOJ01001293
176192
Bacteroidota
TCT
Arg
>WENV183141150
OLOJ01001233
280446
Bacteroidota
TTT
Lys
>WENV183140656
OLOJ01000063
484496
Bacteroidota
TTG
Gln
>WENV183141597
OLOJ01006003
398836
Bacteroidota
GCA
Cys
>WENV183141585
OLOJ01005466
398836
Bacteroidota
GCA
Cys
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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