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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
25 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183146306
OLOM01005725
400161
Bacteroidota
GGT
Thr
>WENV183145837
OLOM01001310
156422
Bacteroidota
TAC
Val
>WENV183145838
OLOM01001310
156422
Bacteroidota
TAC
Val
>WENV183145839
OLOM01001310
156422
Bacteroidota
TAC
Val
>WENV183145660
OLOM01000610
118221
Bacteroidota
CAA
Leu
>WENV183145661
OLOM01000610
118221
Bacteroidota
CAA
Leu
>WENV183145741
OLOM01000901
56385
Bacteroidota
TGA
Ser
>WENV183145742
OLOM01000901
56385
Bacteroidota
TGA
Ser
>WENV183146561
OLOM01011292
57645
Bacteroidota
TGA
Ser
>WENV183146307
OLOM01005725
312035
Bacteroidota
CCA
Trp
>WENV183146771
OLOM01021340
175944
Bacteroidota
CAT
Met
>WENV183146632
OLOM01013686
280451
Bacteroidota
CGT
Thr
>WENV183145787
OLOM01001062
404109
Bacteroidota
CTC
Glu
>WENV183146348
OLOM01006268
404109
Bacteroidota
CTC
Glu
>WENV183145496
OLOM01000197
46648
Bacteroidota
TAA
Leu
>WENV183145878
OLOM01001509
280478
Bacteroidota
GCC
Gly
>WENV183145880
OLOM01001509
280478
Bacteroidota
GCC
Gly
>WENV183146685
OLOM01015530
187400
Bacteroidota
GTT
Asn
>WENV183146007
OLOM01002419
187814
Bacteroidota
GTC
Asp
>WENV183146006
OLOM01002419
187814
Bacteroidota
GTC
Asp
>WENV183146005
OLOM01002419
187814
Bacteroidota
GTC
Asp
>WENV183146004
OLOM01002419
187814
Bacteroidota
GTC
Asp
>WENV183146673
OLOM01015254
178134
Bacteroidota
TGG
Pro
>WENV183146672
OLOM01015254
178134
Bacteroidota
TGG
Pro
>WENV183145884
OLOM01001538
481328
Bacteroidota
TTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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