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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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Keyword
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BLAST
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HOW TO USE
tRNA genes obtained from an environmental sample assignable to Identical sequence group.
HIT:
44 sequence(s).
Download Sequence
View ClustalW result
Reliable assignment
Tentative assignment
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
>WENV183171165
OLPB01027199
284109
Bacillota
>WENV183171144
OLPB01020052
140922
Bacillota
GTA
Tyr
>WENV183171106
OLPB01015100
20870
Bacillota
CGA
Ser
>WENV183170579
OLPB01000157
290391
Bacillota
TAC
Val
>WENV183170601
OLPB01000196
291579
Bacillota
GAA
Phe
>WENV183171085
OLPB01012603
184497
Bacillota
GGG
Pro
>WENV183171008
OLPB01006421
184497
Bacillota
GGG
Pro
>WENV183170570
OLPB01000138
184497
Bacillota
GGG
Pro
>WENV183170540
OLPB01000078
184497
Bacillota
GGG
Pro
>WENV183171176
OLPB01028265
400752
Bacillota
GTT
Asn
>WENV183170612
OLPB01000231
179176
Bacillota
ACG
Arg
>WENV183171015
OLPB01007047
184687
Bacillota
CAT
Met
>WENV183170771
OLPB01000986
481217
Bacillota
GCA
Cys
>WENV183171193
OLPB01031141
290325
Bacillota
GCC
Gly
>WENV183170715
OLPB01000619
21311
Bacillota
GCT
Ser
>WENV183171102
OLPB01014623
481244
Bacillota
CCC
Gly
>WENV183171134
OLPB01018953
284627
Bacillota
GAA
Phe
>WENV183171058
OLPB01010140
314710
Bacillota
CGT
Thr
>WENV183171155
OLPB01024175
332864
Bacillota
CTT
Lys
>WENV183171143
OLPB01020052
284110
Bacillota
GAA
Phe
>WENV183171148
OLPB01020617
284107
Bacillota
CGC
Ala
>WENV183171178
OLPB01028998
282730
Bacillota
TAC
Val
>WENV183171040
OLPB01008678
497729
Bacillota
CCA
Trp
>WENV183170942
OLPB01003782
497729
Bacillota
CCA
Trp
>WENV183170928
OLPB01003035
497729
Bacillota
CCA
Trp
>WENV183170868
OLPB01002062
497729
Bacillota
CCA
Trp
>WENV183170729
OLPB01000710
497729
Bacillota
CCA
Trp
>WENV183171183
OLPB01029093
180688
Bacillota
GTC
Asp
>WENV183171127
OLPB01018560
56079
Bacillota
AAG
Leu
>WENV183170583
OLPB01000159
398857
Bacillota
TTC
Glu
>WENV183170794
OLPB01001222
104114
Bacillota
CAG
Leu
>WENV183171159
OLPB01025201
400626
Bacillota
CCG
Arg
>WENV183171140
OLPB01019515
291597
Bacillota
TGC
Ala
>WENV183170991
OLPB01005612
127792
Bacillota
TAG
Leu
>WENV183170600
OLPB01000196
58120
Bacillota
AAG
Leu
>WENV183170552
OLPB01000105
58120
Bacillota
AAG
Leu
>WENV183170790
OLPB01001178
46835
Bacillota
TAA
Leu
>WENV183170555
OLPB01000110
330413
Bacillota
CTT
Lys
>WENV183170497
OLPB01000020
330413
Bacillota
CTT
Lys
>WENV183170809
OLPB01001366
280476
Bacillota
TTT
Lys
>WENV183170929
OLPB01003074
332651
Bacillota
GTT
Asn
>WENV183171181
OLPB01029093
285556
Bacillota
TGT
Thr
>WENV183170408
OLPB01000001
317820
Bacillota
TAC
Val
>WENV183171147
OLPB01020573
481173
Bacillota
CTG
Gln
Select
Sequence ID
Genome ID
(or Accession No.)
Identical group No.
Phylum/Class
(Sample source for ENV)
Anticodon
AA
Download Sequence
View ClustalW result
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